Symphalangus syndactylus (siamang): 129467253
Help
Entry
129467253 CDS
T10134
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
Membrane trafficking [BR:
ssyn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
129467253 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129467253
NCBI-ProteinID:
XP_055107506
LinkDB
All DBs
Position
18:85676671..85778301
Genome browser
AA seq
1998 aa
AA seq
DB search
MALLIHLKTVSELRGRGDRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNE
MLEIQVFNYSKVFSNKLIGTFRMVLQKVVEESYVEVTDTLIDDNNAIIKTSLCVEVRYQA
TDGTVGSWDDGDFLGDESLQEEEKDSQETDGLLPSSRPSSQPPGEKSFRRAGRSVFSAMK
LGKNRSHKEEPQRPDEPAVLEMEDLDHLAIRLGDGLDPDSMSLASVTALTTNVSNKRSKP
DIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEY
FVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILS
DPDDLSSGLKGYVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFY
VKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNE
QVVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMY
GSTRNYTLLDEHQDLNEGLGEGVSFRARLLLGLAVEILDTSNPELTSSTEVQVEQATPIS
ESCAGKMEEFFLFGAFLEASMIDRRNGDKPITFEVTIGNYGNEVDGLSRPQRPRPRKEPG
DEEEVDLIQNASDDEASDGGDLASVSSTPPMRPQVTDRNYFHLPYLERKPCIYIKSWWPD
QRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCCRFLSLADK
DQGHSSRTRLDRERLKSCMRELESMGQQARMLRAQVKRHTVRDKLRLCQNFLQKLRFLAD
EPQHSIPDIFIWMMSNNKRVAYARVPSKDLLFSIVEEETGKDCAKVKTLFLKLPGKRGFG
SAGWTVQAKVELYLWLSLSKQRKELLCGLPCGFEEVKAAQGLGLHAFPPVSLVYTKKQAF
QLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYG
EAHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEVYCPPRFPPQLEYYQIYR
GNATAGDLLAAFELLQIGPAGKADLPPINGPVDVDRGPIMPVPVGIRPVLSKYRVEVLFW
GLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHP
PLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDRLAPSWNTTVRLLRRCRVLCNGGSS
SHSTGEVVVAMEPEVPIKKLETMVKLDATSEAVVKVDVAEEEKEKKKKKKKGTAEEPEEE
EPDESMLDWWSKYFASIDTMKEQLRQQEPSGIDLEEKEEVDNTEGLKGSMKGKEKARAAK
EEKKKKTQSSGSGQGSEAPEKKKPKIDELKVYPKELESEFDNFEDWLHTFNLLRGKTGDD
EDGSTEEERTVGRFKGSLCVYKVPLPEDVSREAGYDSTYGMFQGIPSNDPINVLVRVYVV
RATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTV
AVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSTHGYNIWRDPMKPSQILTSL
CKDGKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQRKPTDEHVALLALRHWEDIPRAGC
RLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIIW
NTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDY
LAAEEKIVISKKESMFSWDETEYKTPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAK
TAKQCTMEMASGEVDVPLMSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEA
EKNPVGLARNEPDPLEKPNRPDTAFVWFLNPLKSIKYLICTRYKWLIIKIVLALLGLLML
GLFLYSLPGYMVKKLLGA
NT seq
5997 nt
NT seq
+upstream
nt +downstream
nt
atggccttgctcatccacctcaagacggtctcggagctgcggggcaggggcgaccggatc
gccaaagtgactttccgagggcaatccttctactctcgggtcctggagaactgtgaggat
gtggctgactttgatgagacgtttcggtggccggtggccagcagcatcgacagaaatgag
atgctggagattcaggttttcaactacagcaaagtcttcagcaacaagctcattgggacc
ttccgcatggtgctgcagaaggtggtagaggagagctatgtggaggtgaccgacacgctg
attgatgacaacaatgctatcatcaagaccagcctgtgcgtggaggtccggtatcaggcc
actgacggcacagtgggctcctgggacgatggggacttcctgggagatgagtctcttcaa
gaggaagagaaggacagccaagagacggatggcctgctcccaagctcccggcccagctcc
cagccccccggagagaagagcttccggagagccgggaggagcgtgttttccgccatgaag
ctcggcaaaaaccggtcccacaaggaggagccccaaagaccagatgaaccggcggtgctg
gagatggaagaccttgaccatctggccattcggctaggggatggactggatcccgactcg
atgtctctagcctcagtcacagctctcaccactaatgtctccaacaagcgatctaagcca
gacattaagatggagccaagtgctgggcggcccatggattaccaggtcagcatcacagtg
atcgaggcccggcagctggtgggcttgaacatggaccccgtggtgtgcgtggaggtgggc
gatgacaagaagtacacgtccatgaaggagtccactaactgcccctattacaatgagtac
ttcgtgttcgacttccatgtctctcctgatgtcatgttcgacaagatcatcaagatttcg
gtgattcactccaagaacctgctacgcagtggcaccctggtgggctccttcaaaatggac
gtgggaaccgtgtactcgcagccagagcaccagttccatcacaagtgggccatcctgtct
gaccccgatgacctctcctcggggctgaagggctacgtgaagtgtgacgttgctgtggtg
ggcaaaggggacaacatcaagacgccccacaaggccaatgagaccgacgaagatgacatt
gaggggaacttgctgctccccgagggggtgccccccgaacgccagtgggcccggttctac
gtgaaaatttaccgagcagaggggctgccccgtatgaacacaagcctcatggccaatgta
aagaaggctttcatcggtgaaaacaaggaccttgtagacccctacgtgcaagtcttcttt
gctggccagaagggcaagacttccgtgcagaagagcagctatgagcccctgtggaatgag
caggtcgtctttacagacctcttccccccactctgcaaacgcatgaaggtgcagatccga
gactcggacaaggtcaatgatgtggccatcggcacccacttcatcgacctgcgcaagatt
tctaatgatggagacaaaggcttcctgcccacactgggcccagcctgggtgaacatgtac
ggctccacgcgtaactacacgctgctggacgagcatcaggacctgaatgagggcctgggg
gagggcgtgtccttccgggcccggctcctgctgggcctggccgtggagatcctggacacc
tccaaccccgagctcaccagctccacagaggtgcaggtggagcaggccacgcccatctcg
gagagctgtgcaggtaaaatggaagaattctttctctttggagcctttctggaggcctca
atgattgatcggagaaacggagacaagcccatcacctttgaggtcaccataggcaactat
gggaacgaagttgatggcctgtcccggccccagcggcctcggccccggaaggaaccaggg
gatgaggaagaagtagacctgattcagaacgcaagtgatgacgaggccagcgatggcggg
gacctggcctcagtctcctccaccccaccaatgcggccccaggtcaccgacaggaactac
ttccatctgccctacctggagcgaaagccctgcatctacatcaagagctggtggccggac
cagcgccgccgcctctacaatgccaacatcatggaccacatcgctgacaagctggaagaa
ggcctgaacgacgtacaggagatgatcaaaacggagaagtcctaccctgagcgtcgcctg
cgaggcgtcctggaggagctgagctgtggctgctgccgcttcctctccctggctgacaag
gaccagggccactcatcccgcaccaggcttgaccgggagcgcctcaagtcctgcatgagg
gagctggaaagcatggggcagcaggccaggatgctgcgggcccaggtgaagcggcacacg
gtgagggacaagctgaggctgtgccagaacttcctgcagaagctgcgcttcctggcggac
gagccccagcacagtattcccgacatcttcatctggatgatgagcaacaacaagcgtgtc
gcctatgcccgtgtgccctccaaggacctgctgttctccatcgtggaggaggagactggc
aaggactgcgccaaggtcaagacgctcttcctcaagttgccagggaagcggggcttcggc
tcggcaggctggacagtgcaggccaaggtggagctctacctgtggctgagcctcagcaaa
cagcgcaaggagctcctgtgcggcctgccctgcggcttcgaggaggtcaaggcggcccag
ggcctgggtctgcatgccttcccgcccgtcagcctggtctacaccaagaagcaggcgttc
cagctccgagcccacatgtaccaggcccgcagcctctttgccgccgacagcagcggactc
tcagaccccttcgctcgggtcttcttcatcaatcagagtcagtgcacagaggtgctgaat
gagaccctgtgtcccacctgggaccagatgctggtgttcgacaacctggagctctatggt
gaagctcatgagctgagggatgatccgcccatcattgtcatcgaaatctacgaccaggat
tccatgggtaaagctgacttcatgggccggaccttcgccaaacccctggtgaagatggca
gacgaggtgtactgcccaccccgcttcccgccccagctcgagtactaccagatctaccgt
ggcaacgccacagctggagacctgctggcggccttcgagctgctgcagattggaccagca
gggaaggctgacctgccccccatcaatggcccggtggacgtggaccgaggtcccatcatg
cctgtgcctgtgggcatccggcccgtgctcagcaagtaccgagtggaggtgctgttctgg
ggcctacgggacctaaagcgggtgaacctggcccaggtggaccggccacgggtggacatc
gagtgtgcagggaagggggtgcagtcgtccctgatccacaattataagaagaaccccaac
ttcaacaccctcgtcaagtggtttgaagtggacctcccagagaacgagctgctgcacccg
cccttgaacatccgtgtggtggactgtcgggccttcggtcgctacacactggtgggctcc
catgccgtcagctctctgcgacgcttcatctaccggcccccagaccgcttggcccccagc
tggaacaccacggttaggcttctccggcgctgccgtgtgctgtgcaatgggggctcctcc
tctcactccacaggggaggttgtggtggctatggagccagaggtacccatcaagaaactg
gagaccatggtgaagctggacgcgacttctgaagctgttgtcaaggtggatgtggctgag
gaggagaaggagaagaagaagaagaagaagaagggcactgcggaggagccggaggaggag
gagccagatgagagcatgctggattggtggtccaagtactttgcctccatcgacaccatg
aaggagcaacttcgacaacaagagccctctggaattgacttggaggagaaggaggaagtg
gacaataccgagggcctgaaggggtcaatgaagggcaaggagaaggcaagggctgccaaa
gaggagaagaagaagaaaacccagagctctggctctggccaggggtccgaggcccccgag
aagaagaaacccaagattgatgagcttaaggtgtaccccaaagagctggagtccgagttt
gataactttgaggactggctgcacactttcaacctgcttcggggcaagaccggggatgac
gaggatggctccactgaggaggagcgcactgtgggacgcttcaagggctccctctgcgtg
tacaaagtgccactcccagaggacgtgtcccgggaagccggctacgactccacctatggc
atgttccagggcatcccaagcaatgaccccatcaatgtgctggtccgagtctatgtggtc
cgggccacggacctgcaccctgccgacatcaacggcaaagctgacccctacatcgccatc
cggctaggcaagactgacatccgtgacaaggagaactacatctccaagcagctcaaccca
gtcttcgggaagtcctttgacattgaggcctccttccccatggaatccatgctgacggtg
gctgtgtatgactgggacctggtgggcactgatgacctcattggggaaaccaagatcgac
ctggagaaccgcttctacagcaagcaccgcgccacctgcggcatcgcccagacctactcc
acacatggctacaatatctggcgggaccccatgaagcccagtcagatcctgaccagcctc
tgcaaagatggcaaagtggatggcccccactttgggccccctgggagagtgaaggtggcc
aaccgcgtcttcactgggccctctgagattgaggacgagaacggtcagaggaagcccaca
gacgagcacgtggcgctgttagccctgaggcactgggaggacatcccccgcgcgggctgc
cgcctggtgccggagcacgtggagacgaggccactgctcaaccccgacaagccgggcatc
gagcagggccgcctggagctgtgggtggacatgttccccatggacatgccagcccctggg
acgcctctggacatctcccctcggaagcccaagaagtacgagctgcgggtcatcatctgg
aacacggatgaggtggtcttggaggacgatgacttcttcacaggggagaagtccagtgac
atcttcgtgagggggtggctgaagggccagcaggaggacaagcaggacacagacgtccac
taccactccctcactggcgagggcaacttcaactggcgctacctgttccccttcgactac
ctggcggcggaggagaagatcgtcatctccaagaaggagtccatgttctcctgggacgag
accgagtacaagacccccgcgcggctcaccctgcagatctgggatgcggaccacttctcc
gctgacgacttcctgggggccatcgagctggacctgaaccggttcccgcggggcgcaaag
acagccaagcagtgcaccatggagatggccagcggggaggtggacgtgcccctcatgtcc
atcttcaagcaaaagcgcgtcaaaggctggtggcccctcctggctcgcaatgagaacgat
gagtttgagctcacgggcaaggtggaggctgagctgcatttactgacagcagaggaggca
gagaagaacccagtgggcctggcccgcaacgaacctgaccccctagagaaacccaaccgg
cctgacacggccttcgtctggttcctcaaccctctcaagtccatcaagtacctcatctgc
acccggtacaagtggctcatcatcaagatcgtgctggcgctgttggggctgctcatgttg
gggctcttcctctacagcctccctggctacatggtcaaaaagctccttggggcatga
DBGET
integrated database retrieval system