KEGG   Symphalangus syndactylus (siamang): 129468230
Entry
129468230         CDS       T10134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA dC->dU-editing enzyme APOBEC-3D-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn03250  Viral life cycle - HIV-1
ssyn05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    129468230
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    129468230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssyn03019]
    129468230
Messenger RNA biogenesis [BR:ssyn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129468230
SSDB
Motif
Pfam: NAD2 APOBEC2 NAD1 APOBEC_N SNAD4 APOBEC_C APOBEC3 APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase AID DUF7136
Other DBs
NCBI-GeneID: 129468230
NCBI-ProteinID: XP_055109487
LinkDB
Position
18:complement(69182063..69193323)
AA seq 386 aa
MNPQMRNPMERMYRRTFYYNFENKPILCGRSYTWLCYKVKIRKDPSKLPWDKGVFQGQVL
PKLQSNHRQEVYFQLENHAEMCFLSWFCGNQLPANRCFQITWFVSWNPCLPCVAKVTKFL
AEHPNVTLTISAARLYYYRARDWRRALRRLHKAGARVKIMDYEDFAYCWENFVCNEGHPF
MPWYKFDDNYAFLHHQLNEILRNLMEVTYPHIFYFHFKNLRKAYGRNETWLCFTMKVIKW
PSRVSWKSGVFLNQVDPETHCHAERCFLSWFCDDILTPNKNYEVTWYTSWSPCPECAGEV
AEFLARHXNVNLTIFTARLYYSWNTDYQEGLRSLSEEGASVDIMEYKHFKYCWENFVYND
DEPFKRWKGLKTNFRFLERKLWEILK
NT seq 1159 nt   +upstreamnt  +downstreamnt
atgaatccacagatgagaaatccgatggagcggatgtatcgacgcacattctactacaac
tttgaaaacaaacccatcctctgtggtcggagctacacctggctgtgctacaaagtgaaa
ataaggaaggacccctcaaagctcccttgggacaaaggggtctttcaaggccaggtacta
cccaaacttcaatcgaatcacaggcaggaggtgtatttccagcttgagaaccacgcagaa
atgtgcttcctctcttggttctgtggcaaccaactgcctgctaacaggtgcttccagatc
acctggtttgtatcatggaacccctgcctgccctgtgtggcgaaggtgaccaaattcttg
gctgagcaccccaatgtcaccctgaccatctctgccgcccgcctctactactaccgggct
agagattggcggagggcgctccgcaggctgcataaggcaggggcccgtgtgaagatcatg
gactatgaagactttgcatactgctgggaaaactttgtgtgcaatgaaggtcacccattc
atgccttggtacaaattcgatgacaattatgcattcctgcaccaccagctaaatgagatt
ctcagaaacctgatggaggtaacgtatccacacatattctacttccactttaaaaaccta
cggaaagcctatggtcggaacgaaacctggctgtgcttcaccatgaaagttataaagtgg
ccctcacgtgtctcctggaagagtggcgtcttcctaaaccaggtggatcctgagacccat
tgtcatgcagaaaggtgcttcctctcttggttctgtgacgacatactgactcccaacaaa
aactacgaggtcacctggtacacatcttggagcccttgcccagagtgtgcaggggaggtg
gcggagttcctggccaggcacaaacgtgaatctcaccatcttcaccgcccgcctctacta
ctcctggaatacagattaccaggaggggctccgcagcctgagtgaggaaggggcctccgt
ggacatcatggagtacaaacactttaaatattgttgggaaaactttgtgtacaatgatga
tgagccattcaagcgttggaagggactaaaaaccaactttcgatttctggaaagaaagct
atgggagattctcaagtga

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