KEGG   Symphalangus syndactylus (siamang): 129469801
Entry
129469801         CDS       T10134                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn01524  Platinum drug resistance
ssyn03440  Homologous recombination
ssyn03460  Fanconi anemia pathway
ssyn04120  Ubiquitin mediated proteolysis
ssyn04151  PI3K-Akt signaling pathway
ssyn05206  MicroRNAs in cancer
ssyn05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129469801 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    129469801 (BRCA1)
   03460 Fanconi anemia pathway
    129469801 (BRCA1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    129469801 (BRCA1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    129469801 (BRCA1)
  09162 Cancer: specific types
   05224 Breast cancer
    129469801 (BRCA1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    129469801 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssyn01009]
    129469801 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssyn04121]
    129469801 (BRCA1)
   03036 Chromosome and associated proteins [BR:ssyn03036]
    129469801 (BRCA1)
   03400 DNA repair and recombination proteins [BR:ssyn03400]
    129469801 (BRCA1)
Enzymes [BR:ssyn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     129469801 (BRCA1)
Protein phosphatases and associated proteins [BR:ssyn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129469801 (BRCA1)
Ubiquitin system [BR:ssyn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129469801 (BRCA1)
  Multi subunit type E3
   BRCC complex
    129469801 (BRCA1)
Chromosome and associated proteins [BR:ssyn03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     129469801 (BRCA1)
DNA repair and recombination proteins [BR:ssyn03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     129469801 (BRCA1)
    BRCA1-A complex
     129469801 (BRCA1)
    BRCA1-B complex
     129469801 (BRCA1)
    BRCA1-C complex
     129469801 (BRCA1)
    BRCA complex
     129469801 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     129469801 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_3 zf-RING_2 zf-RING_5 RING_XB3-XBAT31 BRCT_2 zf-RING_6 zf-Nse zf-ANAPC11 zf-RING_10 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 129469801
NCBI-ProteinID: XP_055112832
LinkDB
Position
20:complement(43638390..43740904)
AA seq 1883 aa
MDLSAVRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQ
CPLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLQYANSYNFAKKENNSPEHLKD
EVSIIQSMGYRNRAKRLLQSENPSLQETSFSVQLSNLGTVRTLRTKQRIQPQKKSVYIEL
GSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDVTNTEHQQPS
NNDLNTTEKRATERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLTKDRMNVEKA
EFCNKSKQPGLARSQHNRWAGSKETCNDRQTPSTEKKVDLNADPLCERKEWNKQKLPCSE
NPTDTEDVPWITLNSSIQKVNEWFSRSDELLSSDDSHDGGSESNAKVADVLDVLNEVDEY
SGSSEKIDLLASDPHESLICKSERVHSKSVESNIEDKIFGKTYRRKASLPNLSHVTENLI
IGAFVTEPQIIQERPLTNKLKHKRRATSGLHPEDFIKKADLAVQKTPEMINQGTNQMEQN
VQVMNITNSGHENKTIRDSIQNEKNPNPIESLEKESAFKAKAEPISSSISNMELELNIHN
SKAPKKNRLRRKSSTRHIHALELVVSRNLSPPNCTELQIDSCSSSEEKKKKKYNQMPVRH
SRNLQLMEDKEPATGAKKSNKPNEQTSKRHDSDTFPELKLTNAPGSFTNCSNTSELKEFV
NPSLPREEKEEKLETVKVSNNAKDPKDLMLSGERVLQTERSVESSSISLVPGTDYGTQES
ISLLEVSTLGKAKTEPNKCVSQCAAFENPKELIHGCSKDTRNDTEGFKYPLGHEVNHSQE
TSIEMEESELDTQYLQNTFKVSKRQSFALFSNPGNPEEECATFSAQSRSLKKRSPKVTFE
CEQKEENQGKNKSNIKPVQTVNISAGFPVVCQKDKPVDYAKCSIKGGSRFCLSSQFRGNK
TGLITPNKHGLLQNPYHIPPLFPIKSIVKTKCKKNLLEENSEEHSMSPEREMGNENIPST
VSTISRNNIRESAFKEASSSNINEVGSSTNEVGSSINEVGSSDENIQAELGRNRGPKLNA
MLRLGVLQPEVYKQSLPRSNCKHPEIKRQEYEEVVQTVNTDFSPCVISDNLEQPMGSSHA
SQVCSETPDDLLDDGEIKEDTSFAENDIKESSAVFSKSVQRGELSRSPSPFTHTHLAQGY
RRGAKKLESSEENLSSEDEELPCFQHLLFGKVSNIPSQSTRHSTVATECLSKNTEENLLS
LKNSLNDCSNQVILAKASQEHHLSEETKCSGSLFSSQCSELEDLTANTNTQDPFLIGSSK
QMRHHSESQGVGLSDKELVSGDEERGPGLEENNQEEQSVDSNLGEAASGYASETSVSEDC
SGLSSQSDILTTQQRDTMQDNLIKLQQEMAELEAVLEQHGSQPSHSYPPIISDSSALEDL
QNPEQSTSEKDSHIRGQRNNSMFSKRPREHIYAVLTSQKSSAYPISQNPEGLFADKFEVS
ADSSTSKNKEPGVERSSPSKCQSLDDRWHMHSCSGSLQNGNYPSQEELIKVVDVEEQQLE
ESGPHDLTEPSYLPRQDLEGTPYLESGISLFSDDSESDPSADRAPESAHVGNIPSSTSAL
KVPQLKVAESAQSPAAAHTTNTAGYNAMEESVSREKPELTASTERVNKRMSMVVSGLTPE
EFMLVYNFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVT
QSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQL
EWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLD
SVALYQCQELDTYLIPQIPHSHY
NT seq 5652 nt   +upstreamnt  +downstreamnt
atggatttatctgctgttcgcgttgaagaagtacaaaatgtcattaatgctatgcagaaa
atcttagagtgtcccatctgtctggagttgatcaaggaacctgtctccacaaagtgtgac
cacatattttgcaaattttgcatgctgaaacttctcaaccagaagaaagggccttcacag
tgtcctttatgtaagaatgatataaccaaaagaagcctacaagaaagtacgagatttagt
caacttgttgaagagctattgaaaatcatttgtgcttttcagcttgacacaggtttgcag
tatgcaaacagttataattttgcaaaaaaggaaaataactctcctgaacatctaaaagat
gaagtttctatcatccaaagtatgggctacagaaaccgtgccaaaagacttctacagagt
gaaaatccttccttgcaggaaaccagtttcagtgtccaactctctaacctcggaactgtg
agaactctgaggacaaagcagcggatacaacctcaaaagaagtctgtctacattgaattg
ggatctgattcttctgaagatacggttaataaggcaacttattgcagtgtgggagatcaa
gaattgttacaaatcacccctcaaggaaccagggatgaaatcagtttggattctgcaaaa
aaggctgcttgtgaattttctgagacggatgtaacaaatactgaacatcaacaacccagt
aataacgatttgaacaccactgagaagcgtgcaactgagaggcatccagaaaagtatcag
ggtagttctgtttcaaacttgcatgtggagccatgtggcacaaatactcatgccagctca
ttacagcatgagaacagcagtttattactcactaaagacagaatgaatgtagaaaaggct
gaattctgtaataaaagcaaacagcctggcttagcaaggagccaacataacagatgggct
ggaagtaaggaaacatgtaatgataggcagactcccagcacagagaaaaaggtagatctg
aatgctgatcccctgtgtgagagaaaagaatggaataagcagaaactgccatgctcagag
aatcctacagatactgaagatgttccttggataacactaaatagcagcattcagaaagtt
aatgagtggttttccagaagtgatgaactgttaagttctgatgactcacatgatgggggg
tctgaatcaaatgccaaagtagctgatgtattggacgttctaaatgaggtagatgaatat
tctggttcttcagagaaaatagacttactggccagtgatcctcatgagtctttaatatgt
aaaagtgaaagagttcactccaaatcagtagagagtaatattgaagacaaaatatttggg
aaaacctatcggaggaaggcaagcctccccaacttaagccatgtaactgaaaatctaatt
ataggagcatttgttactgagccacagataatacaagagcgtcccctcacaaataaatta
aagcataaaaggagagctacatcaggccttcatcctgaggattttatcaagaaagcagat
ttggcagttcaaaagactcctgaaatgataaatcagggaactaaccaaatggagcagaat
gttcaagtgatgaatattactaatagtggtcatgagaataaaacaatacgtgattctatt
cagaatgagaaaaatcctaacccaatagaatcactcgaaaaagaatctgctttcaaagcg
aaagctgaacctataagcagcagtataagcaatatggaactcgaattaaatatccacaat
tcaaaagcacctaaaaagaataggctgaggaggaagtcttctaccaggcatattcatgcg
cttgaactagtagtcagtagaaatctaagtccacctaattgtactgaattacaaattgat
agttgttctagcagtgaagagaaaaagaaaaaaaagtacaaccaaatgccagtcaggcac
agcagaaacctacaactcatggaagataaagaacctgcaactggagctaagaagagtaac
aagccaaatgaacagacaagtaaaagacatgacagcgatactttcccagagctgaagtta
acaaatgcacctggttcttttactaactgttcaaataccagtgaacttaaagaatttgtc
aatcctagccttccaagagaagaaaaagaagagaaactagaaacagttaaagtgtctaat
aatgccaaagaccccaaagatctcatgttaagtggagaaagggttttgcaaactgaaaga
tctgtagagagtagcagtatttcattggtacctggtactgattatggcactcaggaaagt
atctcgttactggaagttagcactctagggaaggcaaaaacagaaccaaataaatgtgtg
agtcagtgtgcagcatttgaaaaccccaaggaactaattcatggttgttccaaagatact
agaaatgacacagaaggctttaagtacccattgggacatgaagttaaccacagtcaggaa
acaagcatagaaatggaagaaagtgaacttgatactcagtatttgcagaatacattcaag
gtttcaaagcgccagtcatttgctctgttttcaaatccaggaaatccagaagaggaatgt
gcaacattctctgcccagtctaggtccttaaagaaacgaagtccaaaagtcacttttgaa
tgtgaacaaaaggaagaaaatcaaggaaagaataagtctaatatcaagcctgtacagaca
gttaatatctctgcaggctttcctgtggtttgtcagaaagataagccagttgattatgcc
aaatgtagtatcaaaggaggctctaggttttgtctatcatctcagttcagaggcaacaaa
actggactcattactccaaataaacatggacttttacaaaacccatatcatataccacca
ctttttcccatcaagtcaattgttaaaactaaatgtaagaaaaacctgctagaggaaaac
tctgaggaacattcaatgtcacctgaaagagaaatgggaaacgagaacattccaagtaca
gtgagcacaattagccgtaataacattagagaaagtgcttttaaagaagccagctcaagc
aatattaatgaagtaggttccagtactaatgaagtgggctccagtattaatgaagtaggt
tccagtgatgaaaacattcaagcagaactaggtagaaacagagggccaaaattgaatgct
atgcttagattaggggttttgcaacctgaggtctataaacaaagtcttcctagaagtaat
tgtaagcatcctgaaataaaaagacaagaatatgaagaagtagttcagactgttaataca
gacttctctccatgtgtgatttcagataacctagaacagcctatgggaagtagtcatgca
tctcaggtttgttctgagacacctgatgacctgctagatgatggtgaaataaaggaagat
actagttttgctgaaaatgacattaaggaaagttctgctgtttttagcaaaagcgtccag
agaggagagcttagcagaagtcctagccctttcacccatacacatttggctcagggttac
cgaagaggggccaagaaattagagtcctcagaagagaacttatctagtgaggatgaagag
cttccctgcttccaacacttgttatttggtaaagtaagcaatataccttctcagtctacc
aggcatagcaccgttgctaccgagtgtctgtctaagaacacagaggagaatttattatca
ctgaagaatagcttaaatgactgcagtaaccaggtaatattggcaaaggcatcccaggaa
catcaccttagtgaggaaacaaaatgttctggtagcttgttttcttcacagtgcagtgaa
ctggaagacttgactgcaaatacaaacacccaggatcctttcttgattggttcttccaaa
caaatgaggcatcattctgaaagccagggagttggtctgagtgacaaggaattggtttca
ggtgatgaagaaagaggaccaggcttggaagaaaataatcaagaagagcaaagcgtggat
tcaaacttaggtgaagcagcatctgggtatgcaagtgaaacaagcgtctctgaagactgc
tcagggctatcctctcagagtgacattttaaccactcagcagagggataccatgcaagat
aacctgataaagctccagcaggaaatggctgaactagaagctgtgttagaacagcatggg
agccagccttctcacagctaccctcccatcataagtgactcttctgcccttgaggacctg
caaaatccagaacaaagcacatcagaaaaagactcgcatatacgtggccaaaggaacaac
tccatgttttctaaaaggcctagagaacatatatatgcagtattaacttcacagaaaagt
agtgcataccctataagccagaatccagaaggcctttttgctgacaagtttgaggtgtct
gcagatagttctaccagtaaaaataaagaaccaggagtggaaaggtcatccccttctaaa
tgccagtcattagatgataggtggcacatgcacagttgctctgggagtcttcagaatgga
aactacccatctcaagaggagctcattaaggttgttgatgtggaggagcaacagctggaa
gagtctgggccacacgatttgacggaaccatcttacttgccaaggcaagatctagaggga
accccttacttggaatctggaatcagcctcttctctgatgactctgaatctgatccttcg
gcagacagagccccagagtcagctcatgttggcaatataccatcttcaacctctgcattg
aaagtaccccagttgaaagttgctgaatctgcccagagtccagctgctgctcatactact
aatactgctgggtataatgcaatggaagaaagtgtgagcagggagaagccagaattgaca
gcttcaacagaaagggtcaacaaaagaatgtccatggtggtgtctggcctgaccccagaa
gaatttatgctcgtgtacaactttgccagaaaacaccacatcactttaactaatctaatt
actgaagagactactcatgttgttatgaaaacagatgctgagtttgtgtgtgaacggaca
ctgaaatatttcctaggaattgcaggaggaaaatgggtagttagctatttctgggtgacc
cagtctattaaagaaagaaaaatgctgaatgagcatgattttgaagtcagaggagatgtg
gtcaatggaagaaaccaccaaggtccaaagcgagcaagagaatcccaggacagaaagatc
ttcagagggctagaaatctgttgctatgggcccttcaccaacatgcccacagatcaactg
gagtggatggtacagctgtgtggtgcttctgtggtgaaggagctttcatcattcaccctt
ggcacaggtgtccacccaattgtggttgtgcagccagatgcctggacagaggacaatggc
ttccatgcaattgggcagatgtgtgaggcacctgtggtgacccgagagtgggtgttggac
agtgtagcactctaccagtgccaggagctggatacctacctgataccccagatcccccac
agccactactga

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