Symphalangus syndactylus (siamang): 129469840
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Entry
129469840 CDS
T10134
Symbol
NLRP1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129469840 (NLRP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129469840 (NLRP1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssyn04054
]
129469840 (NLRP1)
Membrane trafficking [BR:
ssyn04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
129469840 (NLRP1)
Pattern recognition receptors [BR:
ssyn04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129469840 (NLRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
PYRIN
NOD2_WH
LRR_6
AAA_16
LRR_1
NPHP3_N
NB-ARC
Birna_VP5
AAA_14
AAA_30
AAA_22
nSTAND3
LRR_4
Zeta_toxin
AAA_5
VapE-like_dom
AAA
Motif
Other DBs
NCBI-GeneID:
129469840
NCBI-ProteinID:
XP_055112949
LinkDB
All DBs
Position
20:62753316..62851384
Genome browser
AA seq
1479 aa
AA seq
DB search
MAGGAWGRLACYLEFLKKEELKEFQLLLANKAHSRSSSGETPTQPEKTSGMDVASYLVAQ
YGEQRAWDLALHTWEQMGLRSLCAQAQEGAGHSPSFPYSPSEPHLGSPSQPTSTAVLMPW
IRELPVGCTQGSERRVLRQLPDTSGRRWREISSSLLYQALPSSPDHESPSQESPSAPTST
AVLGSWGSPPQPSLAPREQEAPGTQWPLDETSGNYYTEIREREIEKSEKGRPPWAVAVGT
PPEVHASLQPHRHPWEPSGRESLCSTWPWKNEDLNQKFTQLLLLQRPHPRSQEPLVKESW
PRDVEEDRGHLIEIRDLFGPGLDTQEPRIVILQGAAGIGKSTLARQVREAWGRGQLYGDR
FQHVFYFSCRELAQSKVVSLAELIGKDCTAAQAPIRQILSRPERLLFILDGVDEPGWVLQ
EPSSELCLHWSQPRPVDALLGSLLGKTILPEASFLITARTTALQNLIPSLEQARWVEVLG
FSESSRKEYFYKYFTDERQAITAFRLVKSNKELWTLCLVPWVSWLACTCLMQQIKRKEKL
TLTSKTTTTLCLRYLSQALQAQPLGPQLRDLCSLAAEGIWQKKTLFSPDDLRKHGLDVAI
ISTLLKMGILQEHPIPLSYSFIHLCFQEFFAAMSYALEDKKGRGKHSNCIIHLEKLLEAY
GTHGLFGAPTTRFLLGLLSDEGEREMKNIFHCRLSQGRKLMHWVPSLQPLLQPHSLEFLH
CLYETQNKTFLTQVMAHFQEMGMCVETDMELLVCTFCIKFSPHVKKLQLIEGRQHRPAWS
PTRVVLFRWAPVTDAYWQILFSVLKVTRNLKELDLSGNSLSHSAVKSLCKTLRCPRCLLE
TLWLAGCGLTAQDCKDLASGLRANQTLTELDLSFNVLRNAGAKHLCQTLRWPSCKLQRLQ
LVSCGLTSGCCQDLASMLSTSSSLMELDLQQNNLGDAGMRLLCKGLRHPACQLTSLGLDQ
MTLSDEMRQQLRALEQEKPQLLIFSRRKPSVMIPIESLDAGETSNSTSSLKRQRLGSETE
SSHVAQADLKPLDWSNPPAKASQSAVIAEGNAPEVAQVEPLCLPSPASQGDLLTKALGTD
DDFWGPTGPVATEIVDKERSLYRVHFPVAGSYHWPNTGLCFVVREAVTIEIEFCVWDQFL
GEINPQHSWMVAGPLLNIKAEPGAVEAVHLPHFVALQGGHVDTSLFQVAHFKEEGMLLEK
PARVELHHIVLENPSFSPLGVLLKMIHNALHFLPITSMVLLYHRLHPEEITFHLYLIPSD
CSIRKAIDDEEMKFQFVRIHKPPPLTPLYMGCRYTVSGSGSGSGMLEILPKELELCYRSP
GEDQLFSEFYVGHLGSGIRLQLKDKKDETLVWEALVKPGDLMPATTLVPPACIGLPSPLD
APRLLHFVDQYREQLIARVTSVEVVLDKLHGQVLSQEQYERVLAEDTRPSQMRKLFSLSQ
SWDRRCKDGLYQALKETHPHLIMELWEKGSKKGLLPLSS
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggagcctggggccgcctggcctgttacttggagttcctgaagaaggaggag
ctgaaggagttccagcttctgctcgccaataaagcgcactccaggagctcttcgggtgag
acacccactcagccagagaagacgagtggcatggacgtggcctcgtacctggtggctcag
tatggggagcagcgggcctgggacctagccctccatacctgggagcagatggggctgagg
tcactgtgcgcccaagcccaggaaggggcaggccactctccctcattcccctacagccca
agtgaaccccacctggggtctcccagccaacccacctccaccgcagtgctgatgccctgg
atccgtgaattgccggtgggatgcacccagggctcagagagaagggttttgagacagctg
cctgacacatctggacgccgctggagagaaatctcttcctcactcctctaccaagctctt
ccaagctccccagaccatgagtctccaagccaggagtcacccagcgcccccacatccaca
gcagtgctggggagctggggatccccacctcagcccagcctagcacccagagagcaagag
gctcctgggacccaatggcctctagatgaaacgtcaggaaattactacacagaaatcaga
gaaagagagatagagaaatcagagaaaggcaggcccccatgggcagtggcggtaggaaca
cccccagaggtgcacgccagcctacagccccaccgccacccatgggagccttctgggaga
gagagcctctgttccacatggccctggaaaaatgaggatttgaaccaaaaattcacacag
ctgctactgctacaaagacctcaccccagaagccaagagcccctggtcaaggaaagctgg
cctcgtgatgtggaggaggatcgaggacatttaattgagatcagagacttatttggccca
ggcctggatacccaagaacctcgcatagtcatactgcagggggctgctggaattgggaag
tcaacactggccaggcaggtgagggaagcctgggggagaggccagctgtatggggaccgc
ttccagcatgtcttctacttcagctgcagagagctggcccagtccaaggtggtgagtctc
gctgagctcattggaaaagactgcacagctgctcaggctcccattagacagatcctgtct
aggccagagcggctgctcttcatcctcgatggtgtagatgagccagggtgggtcttacag
gagccgagttccgagctctgtctgcactggagccagccgcggccagtggatgcactgctg
ggcagtttgctggggaaaaccatacttcctgaggcttcgttcctgatcacagctcggacc
acagctctgcagaatctcattccttctttggagcaggcacgttgggtagaggtcctgggg
ttctctgagtccagcaggaaggaatatttctacaaatatttcacagatgaaaggcaagca
attacagcctttaggttggtcaaatcaaacaaagaactctggaccctgtgtctcgtgccc
tgggtgtcctggctggcctgcacttgcctgatgcagcagataaagcggaaggaaaaactc
acactgacttccaagaccaccacgaccctctgtctgcgttacctttcccaggctctccaa
gctcagccattgggaccccagctcagagacctctgctctctggctgctgaaggcatctgg
caaaaaaagacccttttcagtccagatgacctcaggaagcatgggttagatgtggccatt
atctccaccctcttgaagatgggtattcttcaagagcaccccatccctctcagctacagc
ttcattcacctctgtttccaggagttctttgcagcaatgtcctatgccttggaggataag
aaggggagaggtaaacattctaattgcatcatacatttggaaaagttgctagaagcatat
ggaacacatggcctgtttggggcaccaaccacacgtttcctattgggcctgttaagtgat
gagggggagagagagatgaagaacatctttcactgccggctgtctcaggggaggaaactg
atgcactgggtcccgtccctgcagccgctgctgcagccacactctctggagttcctccac
tgtttgtacgagactcagaacaaaacgttcctgacacaagtgatggcccatttccaagaa
atgggcatgtgtgtagaaacagacatggagctcctagtgtgcactttctgcattaaattc
agcccccacgtgaagaagcttcaactgattgagggcagacagcacagaccagcatggagc
cccaccagggtagtcctgttcaggtgggccccagtcacagatgcctattggcagattctc
ttctccgtcctcaaggtcaccagaaacctaaaggagctggacctaagtggaaactcgctg
agccactctgcagtgaagagtctttgtaagaccctgagatgccctcgctgcctcctggag
accctgtggttggctggctgtggcctcacagctcaggactgcaaggaccttgcctctggg
ctgagagccaaccagaccctgaccgagctggacctgagcttcaatgtgctcaggaatgct
ggagccaaacacctttgccagacactgagatggccgagctgcaagctacagcgactgcag
ctggtcagctgtggcctcacgtctggctgctgccaggacctggcctcgatgctcagcacc
agctccagcctgatggagctagacctgcagcagaacaacctgggtgacgctggcatgcga
ctgctctgtaaggggctcaggcatcctgcctgccaactcacaagcctggggctggaccag
atgactctgagcgatgagatgaggcagcagctgagggccctggagcaggagaagcctcag
ctgctcatcttcagcagacggaaaccaagtgtgatgatccctattgagagcctagatgca
ggagagacaagtaatagcacgtcctcactcaagcggcagagactcggatcagagacggag
tcttcccacgttgctcaggctgatctcaaacccctggactggagcaatcctcctgccaag
gcctcccaaagtgctgtgattgcagagggaaacgccccagaggtagcacaggtggaaccc
ttgtgcctgccttctcctgcctctcagggcgacctgcttacgaaggctttggggactgac
gatgacttctggggccccacagggcctgtggctactgagatagttgacaaagaaaggagc
ctgtaccgagttcacttccctgtggctggctcctaccactggcccaacacgggtctctgc
tttgtagtgagagaagcggtgaccattgagattgaattctgtgtgtgggaccagttcctg
ggtgagatcaacccacagcacagctggatggtggcagggcctctgctgaacatcaaggct
gagcctggagccgtggaagctgtgcacctccctcactttgtggctctccaagggggccat
gtggacacatccctgttccaagtggcccactttaaagaggaggggatgctcctggagaag
ccagccagggtggagctgcatcacatagttctggaaaaccccagcttctcccccttggga
gtcctcctgaaaatgatccataatgccctgcacttccttcccatcacctccatggtgttg
ctttaccaccgcctccatcctgaggaaatcaccttccacctctacctgatcccaagtgac
tgctccattcggaaggccatagatgatgaagaaatgaaattccagtttgtgcgaatccac
aagccacccccgctgaccccactttatatgggctgtcgttacactgtgtcggggtctggt
tctggttcagggatgctggaaatactccccaaggaactggagctctgctatcgaagccct
ggagaagaccagctgttctcagagttctacgttggccacttgggatcagggatcaggctg
caattgaaagacaagaaagatgagactctggtgtgggaggccttggtgaaaccaggagat
ctcatgcctgcaactactctggtgcctccagcctgcataggcttaccttcacctctggat
gccccacggttgctgcacttcgtggaccagtatcgagagcaactgatagcccgagtgaca
tcggtggaggttgtcttggacaaactgcatggacaggtgctgagccaggagcagtacgag
agggtgctggctgaggacaccaggcccagccagatgcggaagctgttcagcttgagccag
tcctgggaccggaggtgcaaagatggactctaccaagccctgaaggagacccatcctcac
ctcattatggaactctgggagaagggcagcaaaaagggactcctgccactcagcagctga
DBGET
integrated database retrieval system
