Symphalangus syndactylus (siamang): 129470114
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Entry
129470114 CDS
T10134
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ssyn Symphalangus syndactylus (siamang)
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssyn04040
]
129470114 (SCN4A)
Ion channels [BR:
ssyn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129470114 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
129470114
NCBI-ProteinID:
XP_055113519
LinkDB
All DBs
Position
20:complement(49557425..49591833)
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AA seq
1836 aa
AA seq
DB search
MARPSLCTLVPLGPECLRPFTRESLAAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEA
GRNLPMIYGDPPPEVIGIPLEDLDPYYSNKKTFIVLNKGKAIFRFSATPALYLLSPFSVV
RRGAIKVLIHALFSMFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKILARG
FCVDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYSNDTW
YSNDTWYGNEMWYGNDSWYANDTWNSHASWATNDTFDWDAYISDEGNFYFLEGSNDALLC
GNSSDAGHCPEGYECIKTGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAG
KTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDKEKEEEFQQMLEKFKKHQE
ELEKAKAAQLLEGGEADGDPAHGKDCNGSLDTSQGEKGAPRQSGSGDSGISDAMEELEEA
HQKCPPWWYKCAHKVLIWNCCTPWLKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHY
PMTEHFDNVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLA
NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKECVCKIALDCNLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLT
VFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKLGIGFAKAFL
LGLLHGKILSPKDIMLSLGEADGAGEAGEAGETAPEDEKKEPPEEDLKKDNHILNHMGLA
DSPPSSIELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDSKKPPQPLYDG
NSSVCSTADYKPPEEDPEEQAEENPEGEQPEECFTEACVQRWPCLYVDISQGRGKKWWTL
RRACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIMEM
LLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDI
SEVNNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKE
EQPQYEVNLYMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGKDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPQNKIQGMVYDLVTKQAFDITIMILICLNMVTMMVETDDQSQL
KVDILYNINMIFIIVFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKY
FVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFG
MSNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPNLENP
GTSVKGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMF
YETWEKFDPDATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDIL
FALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRR
HLLQRSVKQASYMYRHSHDGSGDDAPEKEGLLANTMSKMYGHENGNSSSLSPEEKGEAGD
AGPTLGLMPISPSDTAWPLAPPPGQTVRPGVKESLV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggccagaccatctctgtgcaccctggtgcctctgggccctgagtgcttgcgccccttc
acccgggagtcactggcagccatagaacagcgggcggtggaggaggaggcccggctgcag
cggaacaagcagatggagatcgaagagcccgaacggaagccacgaagtgacttggaggct
ggcaggaacctacccatgatctatggagaccccccgccggaggtcatcggcatccccctg
gaggacctggatccctactacagcaataagaagaccttcatcgtcctcaacaagggcaag
gccatcttccgcttctccgccacacctgctctctacctgttgagccccttcagcgtggtc
aggcgcggggccatcaaggtgctcatccacgcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtatttatgaccatgagtgacccgcctccctggtccaagaatgtg
gagtacaccttcacagggatctacacctttgagtccctcatcaagatactggcccgaggc
ttctgtgtcgatgacttcacattcctccgggacccctggaactggctggacttcagtgtc
atcatgatggcgtacctgacagagtttgtggacttgggcaacatctcagccctgaggacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggggccctgatccagtcggtgaaaaagctgtcggatgtgatgatcctcactgtcttctgc
ctgagtgtctttgcactggtgggactgcagctcttcatgggaaacctgaggcagaagtgt
gtgcgctggcccccgccgttcaacgacaccaacaccacgtggtacagcaatgacacgtgg
tacagcaatgacacatggtatggcaatgagatgtggtatggcaatgactcatggtatgcc
aacgacacgtggaacagccatgcaagctgggccaccaacgatacctttgattgggacgcc
tacatcagtgatgaagggaacttctacttcctggagggctccaacgatgccctgctctgt
gggaacagcagtgatgctgggcactgccccgagggttacgagtgcatcaagaccgggcgg
aaccccaactatggctacaccagctatgacaccttcagctgggccttcctggctctcttc
cgcctcatgacacaggactattgggagaacctcttccagctgacccttcgagcagctggc
aagacctacatgatcttcttcgtggtcatcatcttcctgggctctttctacctcatcaat
ctgatcctggccgtggtggccatggcatatgccgagcagaacgaggccaccctggccgag
gataaggagaaagaggaggagtttcagcagatgcttgagaagttcaaaaagcaccaggag
gagctggagaaggccaaggctgcccaacttctggaaggtggggaggcagatggggaccca
gcccatggcaaagactgcaatggcagcctggacacatcgcaaggggagaagggagcccca
aggcagagcggcagcggagacagcggcatctccgacgccatggaagaactggaagaggcc
caccagaagtgcccaccatggtggtacaagtgcgcccacaaagtgctcatatggaactgc
tgcaccccgtggctgaagttcaagaacatcatccacctgatcgtcatggacccgttcgtg
gacctgggcatcaccatctgcatcgtgctcaacacgctcttcatggccatggaacattac
cccatgacggagcactttgacaacgtgctcactgtgggcaacctggtcttcacaggcatc
ttcacagcagagatggttctgaagctgatcgccatggacccctacgagtatttccagcag
ggttggaatatcttcgacagcatcatcgtcaccctcagcctggtagagctaggcctggcc
aacgtacagggactgtctgtgctacgctccttccgtctgctgcgggtcttcaagctggcc
aagtcgtggccgacgctgaacatgctcatcaagatcattggcaattcagtgggggcgctg
ggtaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtggtgggcatgcag
ctgttcggcaagagctacaaggagtgcgtgtgcaaaatcgccttggactgcaacctgcca
cgctggcacatgcacgacttcttccactccttcctcatcgtcttccgcatcctgtgcggg
gagtggatcgagaccatgtgggactgcatggaggtggccggccaagccatgtgcctcacc
gtcttcctcatggtcatggtcattggcaacctcgtggtcctgaacctgttcctggctctg
ctgctgagctccttcagcgccgacagtctggcagcctcagatgaggacggcgagatgaac
aacctgcagattgccatcgggcgcatcaagttgggcatcggctttgccaaggccttcctc
ctggggctgctgcatggcaagatcctgagccccaaggacatcatgctcagcctcggagag
gctgacggggccggggaggctggagaggcaggggagactgcccccgaggacgagaagaag
gagccgcccgaggaggacctgaagaaggacaatcacatcctgaaccacatgggcctggct
gacagtcccccatccagcatcgagctggaccaccttaacttcatcaacaacccctacctg
accatacaggtgcccatcgcctctgaggagtccgacctggagatgcccaccgaggaggaa
accgacactttctcggagcctgaggatagcaagaagccaccgcagcctctctatgatggg
aactcgtccgtctgcagcacggctgactacaagcctcccgaggaggaccctgaggagcag
gcagaggagaaccccgagggggagcagcctgaggagtgcttcacggaggcctgcgtgcag
cgctggccctgcctctacgtggacatctcccagggccgcgggaagaagtggtggactctg
cgcagagcctgcttcaagatcgtcgagcacaattggttcgagaccttcattgtcttcatg
atcctgctcagcagcggggctctggccttcgaggacatctacattgagcagcgtcgagtc
atccgcaccatcctcgaatatgctgacaaggtcttcacctacatcttcatcatggagatg
ctactcaaatgggtggcctacggctttaaggtgtacttcaccaatgcctggtgctggctc
gacttcctcatcgtggacgtctccatcatcagcttggtggccaactggctgggctactcg
gagctgggacccatcaaatccctgaggacactgcgggccctgcgtcccctaagggcactg
tcccgattcgagggcatgagggtggtggtgaacgctctcctgggcgccatcccctccatc
atgaacgtgctgctcgtctgcctcatcttctggctgatcttcagcatcatgggtgtcaac
ctgtttgccggcaagttctactactgcatcaacaccaccacctctgagaggttcgacatc
tccgaggtcaacaacaagtccgagtgcgagagcctcatgcacacgggccaggtccgctgg
ctcaatgtcaaggtcaactacgacaacgtgggtctgggctacctctccctcctgcaggtg
gccaccttcaagggttggatggacatcatgtatgcagccgtggactcccgggagaaggag
gagcagccgcagtacgaggtgaacctctacatgtacctctactttgtcgtcttcatcata
tttggctccttcttcaccctcaacctcttcattggtgtcatcattgacaacttcaaccag
cagaagaagaagttaggagggaaagacatctttatgacagaggaacagaagaaatactat
aacgccatgaagaagcttggatccaagaagcctcagaagccaattccccggccccagaac
aagatccagggcatggtgtatgacctcgtgacgaagcaggccttcgacatcaccatcatg
atcctcatctgcctcaacatggtcaccatgatggtggagacagatgaccagagccagctc
aaggtggacatcctgtacaacatcaacatgatcttcatcatcgtcttcacaggggagtgc
gtgctcaagatgctcgccctgcgccagtactacttcaccgtcggctggaacatcttcgac
ttcgtggtcgtcatcctgtccattgtgggccttgcgctctccgacctgatccagaagtac
ttcgtgtcacccacgctgttccgtgtgatccgcctggcgcggatcgggcgtgtcctgcgg
ctgatccgcggggccaagggcatccggacgctgctgttcgccctcatgatgtcgctgcct
gccctcttcaacatcggcctcctcctcttcctggtcatgttcatctactccatcttcggc
atgtctaactttgcctacgtcaagaaggagtcaggcatcgatgatatgttcaacttcgag
accttcggcaacagcatcatctgcctgttcgagatcaccacgtcggctggctgggacggg
ctcctcaaccccatcctcaacagcgggcccccggactgtgaccccaacctggagaacccg
ggcactagtgtcaagggtgactgcggcaacccctccatcggcatctgcttcttctgcagc
tatatcatcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaac
ttcaatgtggccacagaggagagcagcgagccccttggtgaggatgactttgagatgttc
tacgagacgtgggagaagttcgaccccgatgccacccagttcatcgcctacagccgcctc
tcagacttcgtggacaccctgcaggaacctctgaggatcgccaagcccaacaagatcaag
ctcatcacgctggacttgcccatggtgccaggagacaagatccactgcctggacatcctc
tttgccctgaccaaagaggtcctgggtgactctggggaaatggacgccctcaagcagacc
atggaggagaagttcatggcggccaacccctccaaggtatcctacgagcccatcaccacc
accctcaagaggaagcacgaggaggtgtgcgccatcaagatccagagggcctaccgccgg
cacctgctacagcgctctgtgaagcaggcatcctacatgtaccgccacagccacgacggc
agcggggacgatgcccctgagaaggaggggctgcttgccaacaccatgagcaagatgtat
ggccacgagaatgggaacagcagctcgctgagcccggaggagaagggcgaggcaggggac
gccggacccactctggggctgatgcccatcagcccctcagacactgcctggcctctcgcc
cctcccccagggcagacagtgcgcccaggagtcaaggagtctcttgtctag
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integrated database retrieval system
