Symphalangus syndactylus (siamang): 129472995
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Entry
129472995 CDS
T10134
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn02010
ABC transporters
ssyn04145
Phagosome
ssyn04612
Antigen processing and presentation
ssyn05163
Human cytomegalovirus infection
ssyn05168
Herpes simplex virus 1 infection
ssyn05169
Epstein-Barr virus infection
ssyn05170
Human immunodeficiency virus 1 infection
ssyn05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129472995 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129472995 (TAP1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
129472995 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
129472995 (TAP1)
05168 Herpes simplex virus 1 infection
129472995 (TAP1)
05163 Human cytomegalovirus infection
129472995 (TAP1)
05169 Epstein-Barr virus infection
129472995 (TAP1)
09163 Immune disease
05340 Primary immunodeficiency
129472995 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssyn02000
]
129472995 (TAP1)
Enzymes [BR:
ssyn01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
129472995 (TAP1)
Transporters [BR:
ssyn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
129472995 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_21
AAA_29
AAA_22
AAA_23
AAA_30
AAA_15
AAA_25
AAA_33
SRP54
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
129472995
NCBI-ProteinID:
XP_055119055
LinkDB
All DBs
Position
23:38896050..38905168
Genome browser
AA seq
748 aa
AA seq
DB search
MASSRFPAPHGCRCLPGASLAWLGTVLLLLADWVLLRTALPRIFSLLVPTALPLLRVWVV
GLSRWAVLWLGARGILRATVGSKSENAGDQGWLAALEPLAAALGLALPGLALFRELISWG
APGAADSTRLLYWGSHPSAFVISYAAALPAAALWHKLGSLWVPGGQGGSGDPVRRLLGCL
GSETRRLSLFLVLVVLSSLGEMAIPFFTGRLTDWILQDGSADTFTRNLTLMSILTIASAV
LEFMGDGIYNNTMGRVNSHLQGEVFGAVLRQETEFFQQNQTGNITSRVTEDTSALSDSLS
ENLSLFLWYLVRGLCLLGIMLWGSVSLTMVTLVTLPLLFLLPKKVGKWYQLLEVQVRDSL
AKSSQVAIEALSAMPTVRSFANEEGEAQKFREKLQEMKTLNQKEALAYAVNSWTTSISGM
LLKVGILYIGGHLVTSGAVSSGNLVTFVLYQKQFTEAVQVLLSLYPRVQKAVGSSEKIFE
YLDRTPRCPPSGLLTPLYLEGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPN
GSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIA
YGLTQKQTMEEITAAAVKSGAHSFISGLPRGYDTEVGEAGSQLSGGQRQAVALARALIRK
PCVLILDDATSALDANSQLRVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAI
RERGTHQELMEKKGCYWAMVQAPADAPE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctagctctaggttccccgctccccatgggtgccgctgcctccccggagcttctctc
gcatggctggggaccgtactgctacttctcgccgactgggtgctgctccggaccgcgctg
ccccgcatattctccctgctggtgcccaccgcgctgccgctgctccgggtctgggtggtg
ggcctgagccgctgggccgtgctctggctgggggcccgcgggatcctcagggcaacggtt
ggctccaagagcgaaaacgcaggtgaccagggctggctggctgctttggagccattagct
gcggcactgggcttggccctgccgggacttgccttgttccgagagctgatctcatgggga
gcccccggggccgcggatagcaccaggctactgtactggggaagtcaccctagcgccttc
gtcatcagttatgcagcggcactgcccgcagcagccctgtggcacaaactcgggagcctc
tgggtgcccggcggtcagggcggctctggagaccctgtgcgtcggcttctaggctgcctg
ggctcggagacgcgccgcctctcgctgttcctggtcctggtggtcctctcctctcttggg
gagatggccattccattctttacgggccgcctcactgactggattctacaagatggctca
gccgataccttcactcggaacttaactctcatgtctattctcaccatagccagtgcagtg
ctggagttcatgggtgatgggatctataacaacaccatgggccgtgtgaacagccacttg
cagggagaggtgtttggggctgtcctgcgccaggagacagagtttttccaacagaaccaa
acaggtaacatcacgtctcgggtaacagaggacacgtccgccctgagtgattctctgagt
gagaatctgagcttatttctgtggtacctggtgcgaggcctatgtctcttggggatcatg
ctctggggatcagtgtccctcaccatggtcaccctggtcaccctgcctctgcttttcctt
ctgcccaagaaggtgggaaagtggtaccagttgctggaagtgcaggtgcgggactctctg
gcaaagtccagccaggtggccattgaggctctgtcggccatgcctacggttcgaagcttt
gccaacgaggagggcgaagcccagaaatttagggaaaagctgcaagaaatgaagacactc
aaccagaaggaggctctggcctatgcagtcaactcctggaccactagtatttcaggtatg
ctgctgaaggtgggaatcctctacatcggtgggcatctggtgaccagtggggctgtaagc
agtgggaaccttgtcacatttgttctctaccagaagcagttcaccgaggctgtgcaggta
ctgctgtctctctaccccagagtacagaaggctgtgggctcctcagagaaaatatttgag
tacctggaccgcacccctcgctgcccacccagtggtctgttgactcccttatacttggag
ggccttgtccagttccaagatgtctcctttgcctacccaaaccgtccagatgtcttagtg
ctacaggggctgacattcaccctacgccctggcgaggtgacggcgctggtgggacccaat
gggtctgggaagagcacagtggctgccctgctgcagaatctataccagcccaccggggga
cagctgctgttggatgggaagcctcttccccaatatgagcaccgctacctgcacaggcag
gtggcagcagtgggacaagagccacaggtatttggaagaagtcttcaagaaaatattgcc
tatggcctgacccagaagcaaactatggaggaaatcacagctgctgcagtaaagtctggg
gcccatagtttcatctctggactccctcggggctatgacacagaggtaggcgaggctggg
agccagctgtcagggggtcagcgacaggcagtggcgttggcccgagcattgatccggaaa
ccatgtgtacttatcctggatgatgccaccagtgccctggatgcaaacagccagttacgg
gtggagcagctcctgtatgaaagccctgagcggtactcccgctcagtgcttctcatcacc
cagcacctcagcctggtggagcaggctgaccacatcctctttctggaaggaggcgctatc
cgggagaggggaacccaccaggagctcatggagaaaaaggggtgctactgggccatggtg
caggctcctgcagatgctccagaatga
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