KEGG   Symphalangus syndactylus (siamang): 129473394
Entry
129473394         CDS       T10134                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain
  KO
K06752  MHC class II antigen
Organism
ssyn  Symphalangus syndactylus (siamang)
Pathway
ssyn04145  Phagosome
ssyn04514  Cell adhesion molecule (CAM) interaction
ssyn04612  Antigen processing and presentation
ssyn04640  Hematopoietic cell lineage
ssyn04658  Th1 and Th2 cell differentiation
ssyn04659  Th17 cell differentiation
ssyn04672  Intestinal immune network for IgA production
ssyn04940  Type I diabetes mellitus
ssyn05140  Leishmaniasis
ssyn05145  Toxoplasmosis
ssyn05150  Staphylococcus aureus infection
ssyn05152  Tuberculosis
ssyn05164  Influenza A
ssyn05166  Human T-cell leukemia virus 1 infection
ssyn05168  Herpes simplex virus 1 infection
ssyn05169  Epstein-Barr virus infection
ssyn05310  Asthma
ssyn05320  Autoimmune thyroid disease
ssyn05321  Inflammatory bowel disease
ssyn05322  Systemic lupus erythematosus
ssyn05323  Rheumatoid arthritis
ssyn05330  Allograft rejection
ssyn05332  Graft-versus-host disease
ssyn05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ssyn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    129473394
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129473394
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    129473394
   04612 Antigen processing and presentation
    129473394
   04658 Th1 and Th2 cell differentiation
    129473394
   04659 Th17 cell differentiation
    129473394
   04672 Intestinal immune network for IgA production
    129473394
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    129473394
   05164 Influenza A
    129473394
   05168 Herpes simplex virus 1 infection
    129473394
   05169 Epstein-Barr virus infection
    129473394
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    129473394
   05152 Tuberculosis
    129473394
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    129473394
   05140 Leishmaniasis
    129473394
  09163 Immune disease
   05310 Asthma
    129473394
   05322 Systemic lupus erythematosus
    129473394
   05323 Rheumatoid arthritis
    129473394
   05320 Autoimmune thyroid disease
    129473394
   05321 Inflammatory bowel disease
    129473394
   05330 Allograft rejection
    129473394
   05332 Graft-versus-host disease
    129473394
  09166 Cardiovascular disease
   05416 Viral myocarditis
    129473394
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    129473394
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssyn04147]
    129473394
Exosome [BR:ssyn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129473394
  Exosomal proteins of epithelial cells
   129473394
  Exosomal proteins of breast milk
   129473394
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 YezG-like Ig_2 C2-set_2
Other DBs
NCBI-GeneID: 129473394
NCBI-ProteinID: XP_055119831
LinkDB
Position
23:complement(39277310..39281388)
AA seq 256 aa
MKMAVSGVPVLGFFIIAVLMSARESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFH
VDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNSTPITNVPPEVTVLT
DSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPF
LPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIITGTIFI
IKGVRKSNAAERRGPL
NT seq 771 nt   +upstreamnt  +downstreamnt
atgaaaatggccgtaagtggagtccccgtgctaggatttttcatcatagctgtgctgatg
agcgctcgggaatcatgggctatcaaagaagaacacgtgatcatccaggccgagttctat
ctgaatcctgaccaatcaggcgagtttatgtttgactttgatggtgatgagattttccac
gtggatatggcaaagaaggagacggtctggcggcttgaagaatttggacgatttgccagc
tttgaggctcaaggtgcattggccaacatagctgtggacaaagccaacctggaaatcatg
acaaagcgctccaattctactccgatcaccaatgtacctccagaggtaactgtgctcaca
gacagccctgtggaactaagagagcccaatgtcctcatctgtttcatcgacaagttcacc
ccaccagtggtcaatgtcacgtggcttcgaaatggaaaacctgtcaccacaggagtgtca
gagacagtcttcctgcccagggaagaccaccttttccgcaagttccactatctccccttc
ctgccctcaactgaggacgtttacgactgcagggtggagcactggggcttggatgagcct
cttctcaagcactgggagtttgatgctccaagccctctcccagagactacagagaatgtg
gtgtgtgccctgggcctgattgtgggtctggtgggcatcatcactgggaccatcttcatc
atcaagggtgtgcgcaaaagcaatgcagcagaacgcagggggcctctgtga

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