Symphalangus syndactylus (siamang): 129473824
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Entry
129473824 CDS
T10134
Name
(RefSeq) LOW QUALITY PROTEIN: patr class I histocompatibility antigen, A-108 alpha chain
KO
K06751
MHC class I antigen
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04144
Endocytosis
ssyn04145
Phagosome
ssyn04218
Cellular senescence
ssyn04514
Cell adhesion molecules
ssyn04612
Antigen processing and presentation
ssyn04940
Type I diabetes mellitus
ssyn05163
Human cytomegalovirus infection
ssyn05165
Human papillomavirus infection
ssyn05166
Human T-cell leukemia virus 1 infection
ssyn05167
Kaposi sarcoma-associated herpesvirus infection
ssyn05168
Herpes simplex virus 1 infection
ssyn05169
Epstein-Barr virus infection
ssyn05170
Human immunodeficiency virus 1 infection
ssyn05203
Viral carcinogenesis
ssyn05320
Autoimmune thyroid disease
ssyn05330
Allograft rejection
ssyn05332
Graft-versus-host disease
ssyn05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129473824
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129473824
04145 Phagosome
129473824
09143 Cell growth and death
04218 Cellular senescence
129473824
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
129473824
04612 Antigen processing and presentation
129473824
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
129473824
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
129473824
05170 Human immunodeficiency virus 1 infection
129473824
05168 Herpes simplex virus 1 infection
129473824
05163 Human cytomegalovirus infection
129473824
05167 Kaposi sarcoma-associated herpesvirus infection
129473824
05169 Epstein-Barr virus infection
129473824
05165 Human papillomavirus infection
129473824
09163 Immune disease
05320 Autoimmune thyroid disease
129473824
05330 Allograft rejection
129473824
05332 Graft-versus-host disease
129473824
09166 Cardiovascular disease
05416 Viral myocarditis
129473824
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
129473824
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssyn04147
]
129473824
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssyn00537
]
129473824
Exosome [BR:
ssyn04147
]
Exosomal proteins
Proteins found in most exosomes
129473824
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssyn00537
]
Antigens
129473824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
MHC_I_C
C1-set
Ig_3
C2-set_3
C2-set_2
ig
LapA_dom
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
129473824
NCBI-ProteinID:
XP_055120767
LinkDB
All DBs
Position
23:complement(41660875..41664404)
Genome browser
AA seq
439 aa
AA seq
DB search
MDWGVPALGIPHLXAVSLLLTTCTGSFFLDTHDADPVLTPIGCRVSREANQCRRGPGSKD
RRHPPGLRFSPDAEDRVMVPRTLLLLLSGALALTQTWACSHSMRYFYTSVSRPGRGEPRF
IAVGYVDDTQFVRFDSDAASLRMEPRASWMEQEGPEYWDQETRNMKAQAQLDRVDLGTLR
GYYNQSEAGSHTIQIMYGCDVGPDGGFLRGYRQDAYDGKDYISLNEDLRSWTAADMAAQI
TKRKWEAAGAAEQHRAYSEGRCVEGLRRYLENGKEMLQRTDPPKTHMTHHPISDHEATLR
CWALGFYPAEITLTWQRDGEDQIQDTELVETRPAGDGTFQKWAAVVVPSGKEQRYTCHVQ
HEGLPEPLTLRWEPSSQTTIPIVGIIAGLVLLGAVITGAVVAAVMWRRKSSDRKGGSYSQ
AASSDSAQGSDVSLTACKV
NT seq
1319 nt
NT seq
+upstream
nt +downstream
nt
atggattggggagtcccagccttggggattccccatctccgcagtttctcttcttctcac
aacctgcaccgggtccttcttcctggatactcacgacgcggacccagttctcactcccat
tgggtgtcgggtttctagagaagccaatcagtgtcgtcgcggtcccggttctaaagaccg
caggcacccaccaggactcagattctccccagacgccgaggaccgtggtcatggtgcccc
gaaccctcctcctgctactctcgggggccctggcactgacccagacctgggcgtgctccc
actccatgaggtatttctacacgtccgtgtcccggccgggacgtggggagccccgcttca
tcgccgtgggctacgtggacgacacgcagttcgtgcggttcgacagcgacgccgcgagcc
tgaggatggagccgcgggcgtcgtggatggagcaggaggggccggagtattgggaccagg
agacacggaacatgaaggcccaggcacagcttgaccgagtggacctagggaccctgcgcg
gctactacaaccagagcgaggccggttctcacaccatccagataatgtatggctgcgacg
tggggcccgacgggggcttcctccgcgggtaccggcaggacgcctacgacggcaaggatt
acatctccctgaacgaggacctgcgctcttggaccgcggcggacatggcggctcagatca
ccaagcgcaagtgggaggcggccggtgcggcggagcagcacagagcctactcggagggga
ggtgcgtggaggggctccgcagatacctggagaacgggaaggagatgctgcagcgcacag
acccccccaagacacatatgactcaccaccccatctctgaccatgaggccaccctgaggt
gctgggccctaggcttctaccctgcggagatcacactgacctggcagagggatggggagg
accagatccaggacacagagcttgtggagaccaggcctgcaggggatggaaccttccaga
agtgggcggctgtggtggtgccttctggaaaggagcagagatacacatgccatgtgcagc
atgagggtctgcccgagcccctcaccctgagatgggagccatcttcccagaccaccatcc
ccatcgtgggcatcattgctggcctggttctccttggagctgtgatcactggagctgtgg
tcgctgctgtgatgtggaggaggaagagctcagatagaaaaggagggagctactctcagg
ctgcaagcagtgacagtgcccagggctctgatgtgtctctcacagcttgtaaagtgtga
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