Symphalangus syndactylus (siamang): 129479370
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Entry
129479370 CDS
T10134
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04140
Autophagy - animal
ssyn05014
Amyotrophic lateral sclerosis
ssyn05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129479370 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129479370 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
129479370 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129479370 (C9orf72)
Membrane trafficking [BR:
ssyn04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129479370 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
129479370
NCBI-ProteinID:
XP_055128353
LinkDB
All DBs
Position
3:complement(79986834..80014520)
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AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPTERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNVFQDVLHRDTLVKAFLDQVFQLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctttgcccaccgccatcgccagctgttgccaagacagagattgctttaagt
ggtgaatcacctttattagcagctacttttgcttactgggacaatattcttggtcctaga
gtaaggcacatctgggctccaaagacagaacaggtacttctcagtgatggagaaataact
tttcttgccaatcacactctaaatggagaaatccttcgaaatgcagagagtggtgctata
gatgtgaagttttttgtcctgtctgaaaagggagtgattattgtttcattaatctttgat
ggaaactggaatggggatcgcagcacatatggactgtcaattatacttccacagacagaa
cttagtttctacctcccacttcacagagtgtgtgttgatagattaacacatataatccgg
aaaggaagaatatggatgcataaggaaagacaagaaaatgtccagaagattatcttagaa
ggcacagagagaatggaagatcagggtcagagtattattccaatgcttactggagaagtg
attcctgtaatggaactgctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacagtactcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctcaatgccatcagctcacacttgcaaacctgtggctgttccgttgtagtaggtagcagt
gcagagaaagtaaataagatagtcagaacattatgcctttttctgactccaacagagaga
aaatgctccaggttatgtgaagcagaatcatcatttaaatatgagtcaggactctttgta
caaggcctgctaaaggattcaactggaagcttcgtgctgcctttccggcaagtcatgtac
gctccatatcccaccacacacatagatgtggatgtcaatactgtgaagcagatgccaccc
tgtcatgaacatatttataatcagcgtagatacatgagatccgagctgacagccttctgg
agagccacttcagaagaagacatggctcaggatacgatcatctacactgacgaaagcttt
actcctgatttgaatgtttttcaagatgtcttacacagagacactctagtgaaagccttc
ctggatcaggtctttcaactgaaacctggcttatctctcaggagtactttccttgcacag
tttctacttgtccttcacagaaaagccttgacactaataaaatatatagaagacgatacg
cagaagggaaaaaaaccctttaaatctcttcggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctggctgagaaaattaaaccaggcctacac
tcttttatttttggaagacctttctacactagtgtgcaagaacgagatgttctaatgact
ttttaa
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