Symphalangus syndactylus (siamang): 129482620 Help Entry 129482620         CDS       T10134                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism ssyn  Symphalangus syndactylus (siamang) Pathway ssyn04015   Rap1 signaling pathway ssyn04115   p53 signaling pathway ssyn04145   Phagosome ssyn04148   Efferocytosis ssyn04151   PI3K-Akt signaling pathway ssyn04350   TGF-beta signaling pathway ssyn04510   Focal adhesion ssyn04512   ECM-receptor interaction ssyn04820   Cytoskeleton in muscle cells ssyn05144   Malaria ssyn05165   Human papillomavirus infection ssyn05205   Proteoglycans in cancer ssyn05206   MicroRNAs in cancer ssyn05219   Bladder cancer Brite KEGG Orthology (KO) [BR:ssyn00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     129482620 (THBS1)    04350 TGF-beta signaling pathway     129482620 (THBS1)    04151 PI3K-Akt signaling pathway     129482620 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129482620 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     129482620 (THBS1)    04148 Efferocytosis     129482620 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     129482620 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     129482620 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     129482620 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     129482620 (THBS1)    05205 Proteoglycans in cancer     129482620 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     129482620 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     129482620 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     129482620 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ssyn04131]     129482620 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ssyn00536]     129482620 (THBS1) Membrane trafficking [BR:ssyn04131]  Endocytosis   Phagocytosis    Opsonins     129482620 (THBS1) Glycosaminoglycan binding proteins [BR:ssyn00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129482620 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  129482620 NCBI-ProteinID:  XP_055134634 LinkDB All DBs Position 5:64517659..64534143 Genome browser AA seq 1170 aa AA seqDB search MGLAWGLGILFLMHVCGTNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDHSGQVFSVV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSVFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSVLL TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSTSCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACKKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQI CNKQDCPIDGCLSNPCFAGVKCTSYPDGSWKCGACPPGYSGNGIQCTDVDECKEVPDACF THNGEHRCKNTDPGYNCLPCPPRFTGSQPFGQGVEYATANKQVCKPRNPCTDGTHDCNKN AKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactaggcatcctgttcctgatgcatgtgtgtggcaccaaccgc attccagagtctgggggagacaacagcgtatttgacatctttgaactcaccggggccgcc cgcaaggggtctgggcgccgactggtgaagggccccgacccttccagcccagctttccgc atcgaggatgccaacctgatcccccctgtgcctgatgacaagttccaagacctggtggat gctgtgcgggcagaaaagggtttcctccttctggcctccctgaggcagatgaagaagacc cggggcacgctgctggccctggagcggaaagaccactctggccaggtcttcagcgtggtg tccaatggcaaggcgggcaccctggacctcagcctgaccgtccaaggaaagcagcacgtg gtgtctgtggaagaagctctcctggcaaccggccagtggaagagcatcaccctgtttgtg caggaagacagggcccagctgtacatcgactgtgaaaagatggagaatgctgagttggac gtccccatccaaagcgtcttcaccagagacctggccagcatcgccagactccgcatcgca aaggggggcgtcaatgacaatttccagggggtgctgcagaatgtgaggtttgtctttgga accacaccagaagacatcctcaggaacaaaggctgctccagctctaccagtgtcctcctc acccttgacaacaatgtggtgaatggttccagccctgccatccgcactaactacattggc cacaagacaaaggacttgcaagccatctgcggcatctcctgtgatgagctgtccagcatg gtcctggaactcaggggcctgcgcaccattgtcaccacgctgcaggacagcatccgcaaa gtgactgaagagaacaaagagttggccaatgagctgaggcggcctcccctgtgctatcac aacggagttcagtacagaaacaatgaggaatggactgttgatagctgcactgagtgtcgc tgtcagaactcagttaccatctgcaaaaaggtgtcctgccccatcatgccctgttccaat gccacagttcctgatggagaatgctgccctcgctgttggcccagcgactctgcggacgat ggctggtctccatggtctgagtggacctcctgttctacgagctgtggcaatggaattcag cagcgcggccgctcctgcgatagtctcaacaaccgatgcgagggctcctcggtccagaca cggacctgccacattcaagagtgtgacaagagatttaaacaggatggtggctggagccac tggtccccgtggtcatcttgttccgtgacatgtggtgatggtgtgatcacaaggatccgg ctctgcaactctcccagcccccagatgaacgggaaaccctgtgaaggcgaagcgcgggag accaaagcctgcaagaaagatgcctgccccatcaatggaggctggggtccttggtcacca tgggacatctgttctgtcacctgtggaggaggggtacagaaacgtagccggctctgcaac aaccccacaccccagtttggaggcaaggactgcgttggtgatgtgacagaaaaccagatc tgcaacaagcaggactgtccaattgatggatgcctgtccaatccctgctttgccggcgtg aagtgtactagctaccctgatggcagctggaaatgtggtgcttgtccccctggttacagt ggaaatggcatccagtgcacagatgttgatgagtgcaaagaagtgcctgacgcctgcttc acccacaatggagagcacaggtgtaagaacacggaccccggctacaactgcctgccctgc cccccacgcttcaccggctcacagcccttcggccagggcgtcgaatatgccacggccaac aagcaggtgtgcaagccccgtaacccctgcacggatgggacccacgactgcaacaagaat gccaagtgcaactacctgggccactatagcgaccccatgtaccgctgcgagtgcaagcct ggctacgccggcaatggcatcatctgtggggaggacacagacctggatggctggcccaat gagaacctggtgtgcgtggccaatgcgacttaccactgcaaaaaggataattgccccaac ctccccaactcagggcaggaagactatgacaaggatggaattggtgatgcctgtgatgat gacgatgacaatgataaaattccagatgacagggacaactgtccattccattacaaccca gctcagtatgactatgacagagatgacgtgggagaccgctgtgacaactgtccctacaac cacaacccagatcaggcagacacagacaacaatggggaaggagacgcctgcgctgcggac attgatggagatggtatcctcaatgaacgagacaactgccaatatgtctacaatgtggat cagagagacactgatatggatggggttggagatcagtgtgacaactgccccttggaacac aatccggatcagctggactctgactcagaccgcattggagatacctgtgacaacaatcag gatattgatgaagatggccaccagaacaatctggacaactgtccctatgtgcccaatgcc aaccaggctgaccatgacaaagatggcaagggagatgcctgtgaccacgatgatgacaac gatggcattcctgatgacagggacaactgcagactcgtgcccaatcccgaccagaaggac tctgatggcgatggtcgaggtgatgcttgcaaagatgattttgaccatgacagtgtgcca gacattgatgacatctgtcctgagaatgttgacatcagtgagaccgatttccgccgattc cagatgattcctctggatcccaaagggacatcccaaaatgaccctaactgggttgtacgc catcagggtaaagaactcgtccagactgtcaactgtgatcctggactcgctgtaggtttt gacgagtttaatgctgtggacttcagtggcaccttcttcatcaacaccgaaagggatgat gactatgctgggtttgtctttggctaccagtccagcagccgcttttatgttgtgatgtgg aagcaagtcacccagtcctactgggacaccaaccccacgagggctcagggatactcgggc ctttctgtgaaagttgttaactccaccacagggcctggcgagcacctgcggaatgccctg tggcacacaggaaacacccctggccaggtgcgcaccctgtggcatgaccctcgtcacata ggctggaaagatttcaccgcctacagatggcgtctcagccacaggccaaagacgggtttc attagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctatgat aaaacctatgctggtggtagactagggttgttcgtcttctctcaagaaatggtgttcttc tccgacctgaaatacgaatgtagagatccctaa

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