Symphalangus syndactylus (siamang): 129484229
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Entry
129484229 CDS
T10134
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04010
MAPK signaling pathway
ssyn04064
NF-kappa B signaling pathway
ssyn04120
Ubiquitin mediated proteolysis
ssyn04140
Autophagy - animal
ssyn04144
Endocytosis
ssyn04380
Osteoclast differentiation
ssyn04620
Toll-like receptor signaling pathway
ssyn04621
NOD-like receptor signaling pathway
ssyn04622
RIG-I-like receptor signaling pathway
ssyn04657
IL-17 signaling pathway
ssyn04722
Neurotrophin signaling pathway
ssyn04936
Alcoholic liver disease
ssyn05132
Salmonella infection
ssyn05133
Pertussis
ssyn05135
Yersinia infection
ssyn05140
Leishmaniasis
ssyn05142
Chagas disease
ssyn05145
Toxoplasmosis
ssyn05152
Tuberculosis
ssyn05160
Hepatitis C
ssyn05161
Hepatitis B
ssyn05162
Measles
ssyn05168
Herpes simplex virus 1 infection
ssyn05169
Epstein-Barr virus infection
ssyn05170
Human immunodeficiency virus 1 infection
ssyn05171
Coronavirus disease - COVID-19
ssyn05200
Pathways in cancer
ssyn05222
Small cell lung cancer
ssyn05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
ssyn05417
Lipid and atherosclerosis
Brite
Enzymes [BR:
ssyn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129484229 (TRAF6)
Membrane trafficking [BR:
ssyn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129484229 (TRAF6)
Ubiquitin system [BR:
ssyn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129484229 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129484229
NCBI-ProteinID:
XP_055137864
LinkDB
All DBs
Position
6:19817453..19839908
Genome browser
AA seq
522 aa
AA seq
DB search
MSLLNCENSCGSSQSESDCCVAMASSCSAATKDDSVGGTASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCHRPFQKFHINIHILK
DCPRRQVSCDNCAASMAFEDKEIHDQNCPLANVICDYCNTILIREQMPNHYDLDCPTAPI
PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYISEVRNFQETIH
QLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNF
GMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDS
HLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLE
ALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaagtgactgctgt
gtggccatggccagctcctgtagtgctgcaacaaaagatgatagtgtgggtggaactgcc
agcacggggaacctctccagctcgtttatggaggagatccagggatatgatgtagagttt
gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcattacgagaagca
gtgcaaacgccatgcggccataggttctgcaaagcctgcatcataaaatcaataagggat
gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttccagac
aattttgcaaaacgtgagattctttctctgatggtgaagtgtccaaatgaaggttgtttg
cacaagatggaactgagacatcttgaggatcatcaagcacattgtgagtttgctcttatg
gattgtccccaatgccaccgtcccttccaaaaattccatattaatattcacattctgaag
gattgtccaaggagacaggtttcttgtgacaactgtgctgcatcaatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgactactgcaatact
atactcatcagagaacagatgcctaatcattatgatctagactgccctacagccccaatt
ccatgcacattcagtacttttggttgccatgaaaagatgcagaggaatcacttggcacgc
cacctacaagagaacacccagtcacacatgagaatgttggcccaggctgttcatagtttg
agccttatacccgactctgggtatatctcagaggtccggaatttccaggaaactattcac
cagttagagggtcgccttgtaagacaagaccatcaaatccgggagctgactgctaaaatg
gaaactcagagtatgtatgtaagtgagctcaaacgaaccattcgaacccttgaggacaaa
gttgctgaaatcgaagcacagcagtgcaatggaatttatatttggaagattggcaacttt
ggaatgcatttgaaatgtcaagaagaggagaaacctgttgtgattcatagccctggattc
tacactggcaaacccgggtacaaactgtgcatgcgcttgcaccttcagttaccgactgct
cagcgctgtgcaaactatatatccctttttgtccacacaatgcaaggagaatatgacagc
cacctcccttggcccttccagggtacaatacgccttacaattcttgatcagtctgaagca
cctgtaaggcaaaaccacgaagagataatggatgccaaaccagagctgcttgctttccag
cgacccacaatcccacggaacccaaaaggttttggctatgtaacttttatgcatctggaa
gccctaagacaaagaactttcattaaggatgacacattattagtgcgctgtgaggtctcc
acccgctttgacatgggtagccttcggagggagggttttcagccacgaagtactgatgca
ggggtatag
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