Symphalangus syndactylus (siamang): 129485911
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Entry
129485911 CDS
T10134
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04137
Mitophagy - animal
ssyn04140
Autophagy - animal
ssyn04217
Necroptosis
ssyn04218
Cellular senescence
ssyn04380
Osteoclast differentiation
ssyn05014
Amyotrophic lateral sclerosis
ssyn05022
Pathways of neurodegeneration - multiple diseases
ssyn05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129485911 (SQSTM1)
04137 Mitophagy - animal
129485911 (SQSTM1)
09143 Cell growth and death
04217 Necroptosis
129485911 (SQSTM1)
04218 Cellular senescence
129485911 (SQSTM1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
129485911 (SQSTM1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129485911 (SQSTM1)
05022 Pathways of neurodegeneration - multiple diseases
129485911 (SQSTM1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
129485911 (SQSTM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssyn04131
]
129485911 (SQSTM1)
03029 Mitochondrial biogenesis [BR:
ssyn03029
]
129485911 (SQSTM1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssyn04147
]
129485911 (SQSTM1)
Membrane trafficking [BR:
ssyn04131
]
Autophagy
Mitophagy
Cargo receptors
129485911 (SQSTM1)
Pexophagy
129485911 (SQSTM1)
Aggrephagy
129485911 (SQSTM1)
Xenophagy
129485911 (SQSTM1)
ER-phagy
ER-phagy recepters
129485911 (SQSTM1)
Other autophagy associated proteins
Midbophagy
129485911 (SQSTM1)
Mitochondrial biogenesis [BR:
ssyn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
129485911 (SQSTM1)
Exosome [BR:
ssyn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129485911 (SQSTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
129485911
NCBI-ProteinID:
XP_055140928
LinkDB
All DBs
Position
7:complement(7450466..7482603)
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AA seq
439 aa
AA seq
DB search
MASLTVKAYLLGKEDAAREIRRFSFCFSPEPEAEAEAAAGPGPCERLLSRVAALFPALRP
GGFQAHYRDEDGDLVAFSSDEELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRN
MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGLHRGHTKLAFPSPFGHLSEGFS
HSRWLRKMKHGHFGWPGWEMGPPGNWSPRPPRAGDARPGPTAESASAPSEDPSVNFLKNV
GESVAAALSPLGIEVDIDVEHGGKRSRLTPVSPESSSTEKSSSQPSSCCSEPSKPGGNVE
AATQSLAEQMRKIALESEGRPEEQMESDNCSGGDEDWTHLSSKEVDPSTGELQSLQMPES
EGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKN
YDIGAALDTIQYSKHPPPL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctcaccgtgaaggcctaccttctgggcaaggaggacgcggcgcgcgagatc
cgccgcttcagcttctgcttcagccccgagcctgaggcggaagccgaggctgcggcaggt
cccgggccctgcgagcggctgctgagccgggtggccgccctgttccccgcgctgcggccc
ggcggcttccaggcgcactaccgcgatgaggacggggacttggttgccttttccagtgat
gaggaattgacaatggccatgtcctatgtgaaggatgacatcttccgaatctacattaaa
gagaaaaaagagtgccggcgggaccaccgcccaccgtgtgctcaggaggcgcctcgcaac
atggtgcaccccaatgtgatctgtgatggctgcaatgggcccgtggtaggaacccgctac
aagtgcagcgtctgcccagactacgacttgtgtagcgtctgtgagggaaagggcttgcac
cggggacacaccaagctcgcgttccccagccccttcgggcacctgtctgagggcttctcg
cacagccgctggctccggaagatgaaacacgggcacttcgggtggccaggatgggaaatg
ggtccaccaggaaactggagcccacgtcctcctcgtgcaggagatgcccgccctggtccc
acggcggaatcagcttctgctccatcggaggatcccagcgtgaatttcctgaagaacgtg
ggggagagtgtggcagctgcccttagccctctgggcattgaagttgacattgatgtggag
cacggagggaaaagaagccgcctgacccccgtctctccagagagttccagcacagagaag
agcagctcacagccaagcagctgctgctctgaacccagcaagccgggtgggaacgttgag
gccgccacgcagtctctggcggagcagatgagaaagatcgccttggagtccgaggggcgc
cctgaggaacagatggagtcggataactgttcaggaggagatgaagactggacccacttg
tcttcaaaagaagtggacccgtctacaggtgaactccagtccctacagatgccagaatcc
gaagggccaagctctctggacccctcccaggagggacccacagggctgaaggaagctgcc
ttgtacccgcatctcccgccagaggctgacccacggctgattgagtccctctctcagatg
ctgtccatgggcttctctgatgaaggcggctggctcaccaggctcttgcagaccaagaat
tatgacatcggggcggctctggacaccatccagtattcaaagcatcccccgccattgtga
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