Symphalangus syndactylus (siamang): 129493318
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Entry
129493318 CDS
T10134
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
ssyn Symphalangus syndactylus (siamang)
Pathway
ssyn04015
Rap1 signaling pathway
ssyn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
129493318 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129493318 (RAPGEF6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
129493318
NCBI-ProteinID:
XP_055155314
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All DBs
Position
11:complement(118402367..118620810)
Genome browser
AA seq
1609 aa
AA seq
DB search
MNSPVDPGARQALRKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARFERYSG
NQVLFCSETIARCWYILLSGSVLVKGSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
AKDNEDNILQREIPARQSRRRFRKINYKGERQTITDDVEVNSYLSLPADLTKMHLTDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDDEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAIILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGIVR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLQFSLNGGSEKGFGIFVEGVEPGSKAADSGLKRGDQIMEVNGQNFENITFMKALEILRN
NTHLALTVKTNIFVFKELLFRTEQEKSGVPHIPKIAEKKSNRHSIQHVPGDIEQTSQEKG
SKKVKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKVDQQSCYIIISKDTTAKEVVCHA
VHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLNSKTGNTHL
KRFEDIVNQETFWVASEILTEANQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
SVARLRGTWEKLPSKYEKHLQDLQDIFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMISKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKFQMMSL
QWEPAYGTLTKNLSEKRSAKSSEMSPVPMRSAGQTTKAHLHQPHRVSQVLQVPAVNLHPI
RKKGQTKDPALNTSLPQKVLGTTEEISGKKHTEDTISVASSLHSSPPASPQGSPHKGYTL
APSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAVPQDERCSSQALAVPESTGALEKTEH
PSGIGDHSQHGPGWTLLKPSLIKCLAVSSSVSNEEISHEHIIIEAADSGRGSWTSCSSSS
HDNFQSLPNPKSWDFLNSYKHTHLDDPIAEVEPTDSEPYSCPKSCSRTCGQCKGNLERKS
WASSSSLSDLYEPNYGTVKRRVLESTPAESSEGLDPKDATDPVYKTVTSSTEKGLIVYCV
TSPKKDDRYREPPPTPPGYLGISLADLKEGPYPHVKPPDYSVAVQRSKMMHNSLSRLPPA
SLSSNLLACVPSKIVTQPQRHNLQPFHPKLADVTDADSEADENEQVSAV
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacccgtggaccctggcgctaggcaggcgttgaggaagaagccacccgagcgg
actcccgaggacttaaatactatttattcttatcttcatggaatggaaatattatcaaat
ctcagggaacatcagcttagattaatgtctgcaagagcacgctttgagagatacagtggc
aatcaggttctcttttgttcagaaacgattgccagatgttggtatatcctgctttctgga
tctgtgcttgtgaaaggctccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtgttagagccttcagaaatgattgtggtagagaat
gccaaagataatgaagataatattctacaaagagaaattcctgccagacaatcccgaaga
agatttcggaaaatcaactataaaggagagcgccaaaccattactgatgatgtggaggtt
aacagctatctttctcttcccgctgatcttaccaagatgcatctcacagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtctggttgtagcattgccagtgactctgga
agcagcagtttatctgatatctatcaggctacggagagtgaggtaggagatgtagatttg
acacgtcttccagaaggacctgttgattctgaggatgacgaagaggaagatgaagagatt
gatcgaacagatccattgcaggggagagatcttgttcgagaatgtcttgaaaaagagcct
gcagacaaaactgatgatgacattgaacaattgctggagtttatgcaccagctccctgct
tttgcaaacatgaccatgtctgtaaggagagaactctgctcagtgatgatttttgaagtg
gtagagcaggctggagctattattcttgaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtggaaatcagtcatccagatggaaaagttgaaaatttgtttatg
ggaaatagttttggaattactcctactctggataagcagtacatgcatggaattgtcagg
actaaagtagatgattgtcagtttgtctgcatagcccagcaagattattggagaatttta
aaccatgtggaaaaaaatacccataaagttgaggaagagggagaaattgttatggtacat
gagcatcgggaactagaccggagtggaaccaggaaaggacacattgtaatcaaagcaaca
cctgagcgtctcataatgcatttaatagaagaacattctatcgtggatccaacttatata
gaagattttctattaacttataggacatttcttgaaagtcctttggatgttgggatcaaa
cttttggaatggttcaagattgacagcttaagagataaggtgacacggattgtattatta
tgggtaaataatcattttaatgattttgaaggtgaccctgctatgactcgatttctagag
gaatttgaaaaaaatctggaagatacaaagatgaatggtcatctccggttattgaatatt
gcctgtgctgcaaaggctaagtggagacaggttgtgctgcaaaaggcttcccgcgagtcc
cctctgcaattcagccttaatggagggagtgagaagggatttggtatttttgttgaagga
gtagaacctggtagcaaagctgctgattcaggactgaaacgtggtgatcagattatggaa
gtaaacggacaaaactttgagaatattacatttatgaaagcccttgaaattttgaggaat
aatactcatcttgcacttactgtgaagaccaacatttttgtgttcaaagagttacttttt
aggactgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagt
aatcgccattctatccagcatgtgccaggagatattgaacagacatcacaggagaaagga
agtaagaaagttaaagcaaatactgtttcaggtggaagaaacaaaatcaggaagattttg
gataaaacacgatttagtatcttgcctccaaagctatttagtgatggaggcctaagccaa
tcacaagatgacagcattgtgggaacaaggcactgtaggcatagtctggctataatgccc
atccctggaacactctcatccagcagccctgatctcctgcagcctactaccagtatgttg
gatttctccaatccttcagatatccctgatcaagttataagagttttcaaagtggatcag
caaagttgctacattatcatcagtaaagacactacagctaaagaagtagtttgtcatgct
gttcatgaatttggtttgaccggtgcatccgacacatattctctctgtgaagtttctgtt
acccctgagggtgtcataaaacagagaagacttccagatcagttctccaaattagctgat
agaattcaactcaatggaaggtattacttaaaaaataacatggaaacagaaaccttatgt
tcagatgaagatgctcaagaactagttaaggaaagccagctatccatgctgcagctcagt
accattgaggtggccacccagctgtcaatgagggactttgatttgtttcgtaatattgag
ccgactgagtacatcgatgacctttttaagttaaattccaaaacaggaaatactcacttg
aagaggtttgaggacattgtaaaccaagagacattctgggttgcctcagaaattttaact
gaagcaaatcagctcaaacgaatgaagattattaagcattttattaaaattgcacttcat
tgtcgagaatgtaagaacttcaattccatgtttgcaataataagtggcttgaacctggca
tctgtagcaagactcagaggtacttgggaaaagttaccaagcaaatacgagaaacatctt
caagatctacaagacatttttgatccgtctagaaacatggcaaagtatagaaatattctt
agtagtcaaagtatgcagcctccaattattccactcttccctgttgtcaagaaagatatg
acatttctacatgaaggaaatgactccaaagtagatggtttagtaaactttgagaagtta
agaatgatttccaaggaaatccgccaagttgttcgaatgacttctgctaacatggaccca
gctatgatgtttcgacagaggaagaagaggtggcggagtctggggtcactgagtcaagga
agcacaaattcaaacatgctggatgttcagggaggtgctcacaaaaaaagggcacgccgc
agctctctgcttaatgccaagaagctatatgaggatgcccaaatggcaaggaaggtgaag
cagtatctttccagtctggatgtagagacagatgaggagaagttccagatgatgtcatta
cagtgggagcctgcatatggtaccttgaccaagaatttaagtgagaaaagatcagccaaa
tcatctgaaatgtctccagtgcctatgaggtcagctggccaaacaactaaagcccacttg
catcaaccccacagagtaagccaggtgcttcaggtgccagctgttaatttgcaccctatc
aggaagaagggacaaacaaaagaccctgcattgaatacaagtttacctcagaaagtttta
ggaacaactgaagaaataagtggtaagaagcatacagaagacactatttctgtggcatca
tctttgcattctagtcctcctgcatctcctcaaggttcccctcacaaaggttacacactt
gctccttcagctaaatctgacaacttgtctgactccagccatagtgagatttcttcacgg
tccagcatcgtgagcaattgttctgttgactccatgtcagcagttccacaggatgagcgg
tgttcctctcaggccctggcagtccctgaatccactggggcattggaaaagacagagcac
ccctcagggataggagatcatagtcaacatggccctgggtggacactcttgaagccatct
ctaatcaaatgtttagctgtctcatcgtctgtgagcaacgaagagatttctcatgagcat
atcattatagaagcagctgacagtggtcgtggaagttggacttcgtgttcaagcagctcc
catgacaacttccaaagccttccaaacccaaaaagctgggattttttgaactcttacaaa
catacccatttggatgaccccattgctgaagttgaacccactgactctgagccctattcc
tgtcctaaaagctgctctagaacttgtgggcagtgtaaaggaaacctagagagaaagagt
tgggcctcctccagttctctgtctgacttgtatgaaccaaactatgggacagttaaacgg
agagtattggagagcaccccagctgagtcatctgaaggcttggaccccaaggatgccact
gacccagtttataaaactgtcacttcaagtacagaaaagggcttgattgtgtactgtgtc
acctcacccaagaaggacgataggtatagggagccacctcccactcctccaggatatttg
gggatttctttagcggacctaaaggaaggaccctacccacacgtaaaacctccagattat
agtgtggcagtgcagaggtcaaagatgatgcataacagcctctctagactgccaccagct
tctctcagtagcaacctcctggcctgtgttccatcgaagattgtaactcagcctcagagg
cataatttgcagccattccatcctaaactagcagatgtgactgatgcagatagcgaagca
gatgaaaatgaacaagtttcagcagtctag
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integrated database retrieval system
