Staphylococcus sp. AntiMn-1: AOB58_75
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Entry
AOB58_75 CDS
T09786
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
stap
Staphylococcus sp. AntiMn-1
Pathway
stap03030
DNA replication
stap03410
Base excision repair
stap03420
Nucleotide excision repair
stap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOB58_75
03410 Base excision repair
AOB58_75
03420 Nucleotide excision repair
AOB58_75
03430 Mismatch repair
AOB58_75
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stap03032
]
AOB58_75
03400 DNA repair and recombination proteins [BR:
stap03400
]
AOB58_75
Enzymes [BR:
stap01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AOB58_75
DNA replication proteins [BR:
stap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOB58_75
DNA repair and recombination proteins [BR:
stap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AOB58_75
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOB58_75
MMR (mismatch excision repair)
DNA ligase
AOB58_75
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AOB58_75
BRITE hierarchy
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Arnt_C
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
ANK36877
UniProt:
A0A192F084
LinkDB
All DBs
Position
75153..77156
Genome browser
AA seq
667 aa
AA seq
DB search
MADLQSRVDELHQLLNRYSFEYYVQDNPSVPDSEYDKLLHELIDIEDAHPEYRTPDSPTV
RVGGSAQSTFEKVRHNTQMLSLGNAFNEEDLRKFDQRIRERIGDVEYMCELKIDGLAVSL
KYENGRFVQGLTRGDGTTGEDITENLKTIHAIPLKIKETRTFEVRGEAYMPRQSFFNLNE
AKAKNDEQAFANPRNAAAGSLRQLDSKLAAKRKLSVFLYSVNDFTQFNANTQSEALDELD
ELGFKTNQERQRVQTIDDVIAYIEHWTEKREALPYDIDGIVIKVNMVAHQEELGFTQKSP
RWAIAYKFPAEEVITDLVDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDK
DIRIGDSVVIKKAGDIIPEVIKSVLDRRPDNAEVYHMPTHCPSCEHELVRIEGEVALRCI
NPKCQAQLVEGMIHFVSRQAMNIDGLGTKIIQQLYDNEKIKDIADIFYLTKEDLLPLDRM
GEKKVDNLINAIEVSKNNSLEKLLFGLGIRHLGVKASQVIAEKYGTMDKLFEITEEDFVG
IHDIGHKVAQSVVTYLENEDIRALINKLKEKNVNMTYKGIKTSDLEGHPDFKDKTIVLTG
KLYQMTRNEASKWLELQGAKVTSSVTKSTDLVIAGEDAGSKLTKAEKFDTAIWSEEDFVQ
KQNEIEG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatttacaatcacgtgtcgatgaattgcatcaattgttaaatcgctatagtttt
gagtactatgttcaagataatccatcagtgccggacagtgaatatgataaattgttgcat
gagttaatagacattgaagatgctcacccagaatatcgaacgcctgactctccaacggta
agagtcggtggttctgctcaatcaactttcgaaaaggtaagacataatacccagatgctc
agcttaggcaatgcatttaatgaagaagacttaagaaaattcgatcaacgtatacgcgaa
cgtataggtgacgtagaatacatgtgtgaattgaaaatagatggcttagcagtatctttg
aaatatgaaaatggccgatttgtacaagggttaacacgtggagatggtactacaggtgag
gatattacagaaaatttaaaaacgattcatgctatccctttgaaaatcaaagaaactaga
acatttgaagttcgcggcgaagcatatatgcctagacaatcattttttaatttaaatgaa
gcaaaagctaagaatgatgaacaagcgtttgcgaatccgcgaaatgctgctgccggttca
cttagacaattagattcaaagctcgcagctaaacgtaaactaagtgtttttctatatagt
gtcaatgattttactcaatttaatgcgaatacgcaaagtgaagcgttagatgaattagat
gagttaggctttaaaacgaaccaagaacgtcaacgtgtacaaacgattgatgatgtgatt
gcatatattgaacattggactgaaaaaagagaagcattaccatatgatattgatggtatt
gtaattaaagtgaatatggtagcacatcaagaggaacttggcttcactcaaaaatcaccg
cgttgggcgattgcatataaattcccagcagaagaagtaattacagatttagtggatatt
gaattaagtataggtaggacaggtgtcgtcacacctacagctattcttgaaccagtaaaa
gttgctggaactactgtttctcgcgcttctctacataatgaagatttgattcatgacaaa
gatattagaattggcgacagtgtagtaattaaaaaagcaggggatattatacctgaagtt
attaaaagtgtattagatagacgtccagataatgcggaagtttatcatatgccaacacat
tgtccaagttgtgaacatgaattagtacgcatagaaggcgaagtagctttgcgttgtatc
aatcctaagtgccaagcacaacttgtggaaggcatgattcattttgtttctcgacaagca
atgaatatcgacggtttaggtacaaaaatcattcaacaactgtatgataatgaaaaaata
aaagacattgcagatattttctacttaacaaaagaagatttattaccgcttgaccgcatg
ggagagaaaaaagtagataacttgattaatgctattgaagtgtctaaaaacaattcttta
gaaaagctattgtttggtttaggtatcagacatcttggcgtaaaagcaagccaagtcata
gctgaaaaatacggcacaatggataaattattcgaaataacagaagaagactttgttggt
atacatgacatcgggcacaaagtagcccaatctgtagtcacgtatttagaaaatgaagat
attcgtgcacttattaataaattaaaagaaaaaaatgttaatatgacatataaaggtata
aagacaagtgatttagaaggccacccagactttaaagataagacaattgtacttactggt
aagttatatcaaatgactagaaacgaagcttcaaaatggttagaacttcaaggtgcaaaa
gttacgagcagtgtaactaaaagtacagacttagttatcgctggtgaggatgcaggctcc
aaattaacaaaagctgaaaaatttgatacagcaatatggtcagaagaagactttgttcag
aagcaaaatgaaatcgagggatag
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