Starkeya sp. ORNL1: G3545_12810
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Entry
G3545_12810 CDS
T06785
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
star
Starkeya sp. ORNL1
Pathway
star01501
beta-Lactam resistance
star01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
star00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G3545_12810
01503 Cationic antimicrobial peptide (CAMP) resistance
G3545_12810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
star02000
]
G3545_12810
01504 Antimicrobial resistance genes [BR:
star01504
]
G3545_12810
Transporters [BR:
star02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
G3545_12810
Antimicrobial resistance genes [BR:
star01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G3545_12810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QJP14442
UniProt:
A0A858X163
LinkDB
All DBs
Position
complement(2672935..2676009)
Genome browser
AA seq
1024 aa
AA seq
DB search
MGISELCIRRPVFATVLSLLMVLVGIVSYSRLTVREYPNIDEPVVSVVTTYPGASASIVE
SQVTQVLEGSIAGIEGIDVLESTSRSESSRITVRFRLEINPDNAASDVRDRVSRVRQRLP
DEIDEPVISKVEADAQPVVFVVFRSDRMSALELSDYIDRYVVDRFKNLTGVADVQIFGER
RYAMRVWIDRERLAAYALTVQDIEDALNAQNVEIPSGRIESTDREFTVLSRTALSTVEQF
NNIVVKRAEGAQVHLSDVARVALGAADERRASRFNNGQAIIVGLIKQAVANPLDVSAGVR
AVLPAVNESLPQGMSATIGNDNAVFIDRSIKSVYHTIAEAVVLVVLVIVVFLRSIRASII
PIVTIPISLITTFSIMFALGFSINTLTLLAFVLAIGLVVDDAIVVLENIFRHIEHGMKPI
PAAIRGAREIGFAVVAMTMTLAAVYAPVAFAPGRTGRLFVEFALTLAGAVVVSGFIALSL
TPMMCSRLLKHDENPGRVSAFIERGLKGLENGYRRLLGGVLRVRPLILLIALIVAGGSGY
FLSILPSELSPVEDRGIVRVNGTAPEGSTIAYTGRYSNEVERILEKEPEIDSVLIINGMP
EVHRFLVIGRLKDWDDRERRQQEIVRKVSPDLRRIAGVNAYANNPPSLGASNNSRPIEYV
LQTSGTYEQLDEYVNRFLERIHDYPGLASVETDLKLNKPEISITIDRAKAADLGIDVAVL
GRTLESLLGGRQVTRFEVGGEQYDVMVQLDARDRASPGTLDTIYLRSSGGQMVQLNNLVN
VRETVAPQELRRFNQLRSATISANLAPGYAQGDALAFLDQAAHDVLPQTVQTDVSGQLRE
FRSAGQSLVLVFILALGFIYLVLSAQFESFRDPVIIMLTVPLSMTGALAALYFSGGTLNV
YSQIGLVTLVGLITKHGILIVEFSNQQQEAGLDRRAAVIEAAVLRLRPILMTTGAMVLGA
MPLAFADGAGAESRAQIGWVIVGGMSLGTLLTLFVVPTVYSLIGRIHRESVVDAHAAGHH
APAE
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggcatatccgagctttgcatccgccgcccggtcttcgccaccgtgctgagcctcctg
atggtgctggtcggcatcgtctcttattcgcgcctcacggtgcgtgaatacccgaatatc
gacgagccggtggtctcggtcgtcaccacctatcccggcgcctctgcgagcatcgtcgag
agccaggtgacgcaggtgctggaaggctcgatcgccggcatcgagggcatcgacgtcctg
gaatccacctcgcgctcggaatccagccgcatcaccgtgcgcttccgcctggagatcaac
ccggacaacgcggcgagcgacgtgcgcgaccgcgtcagccgggtgcgccagcgcctgccc
gacgagatcgacgagccggtgatctccaaggtcgaggccgacgcccagccggtggtgttc
gtggtgttccgctccgaccgcatgtcggcgctggagctctccgactatatcgaccgctat
gtggtcgaccgcttcaagaacctcaccggcgtcgccgacgtgcagatcttcggcgagcgg
cgctacgccatgcgagtgtggatcgaccgcgagcgcctcgcggcctatgccctcaccgtg
caggacatcgaggacgcgctgaacgcgcagaatgtcgagatcccgtccgggcgcatcgag
agcaccgaccgcgaattcaccgtgctctcgcgcaccgcgctgtctaccgtcgagcagttc
aacaacatagtggtgaagcgcgccgagggtgcgcaggtgcatctgtcggacgtcgcccgc
gtcgcgcttggcgccgccgacgagcgccgcgccagccgcttcaataacggccaggccatc
attgtcggcctcatcaagcaggcagtcgccaatccgctcgacgtctccgccggcgtccgc
gccgtgctgcccgcggtgaatgagagcctgccgcagggcatgagcgccaccatcggcaac
gacaatgcggtgttcatcgaccgctcgatcaagtcggtctaccacaccatcgccgaagcc
gtggtgctggtggtgctggtgatcgtggtgttcctgcgctcgatccgcgcctcgatcatc
ccgatcgtcaccatcccgatctcgctgatcaccaccttctcgatcatgttcgcgctcggc
ttcagcatcaacacgctgacgctgctcgccttcgtgctcgccatcggcctcgtggtggac
gacgccatcgtggtgctggagaacatcttccgccacatcgagcacggcatgaagccgatc
ccagccgctatccggggcgcgcgcgagatcggctttgccgtcgtcgccatgaccatgacg
ctggcggcggtctatgcccccgtcgcctttgcgccgggccgcactggacggctgttcgtc
gaattcgcgctgacgctggccggcgccgtcgtggtctccggcttcatcgcgctctcgctc
accccgatgatgtgctcgcgcctcctgaagcacgacgagaatccgggccgcgtctccgcc
ttcatcgaacgcgggctgaaagggctggagaacggctatcgccgcctgctcggcggggtg
ctcagggtgcggccgctgatcctgctcatcgcgctcatcgtcgccggcggcagcggctat
ttcctctccatcctgccgtcggaactctcgccggtcgaggatcgcggcatcgtgcgcgtc
aacggcacggcgcccgaaggctcgacgatcgcctacaccggacgctattccaacgaagtc
gagcgcatcctcgagaaggagccggagatcgacagcgtcctcatcatcaacggcatgccc
gaggtgcaccgcttcctcgtcatcggccggctgaaggattgggacgaccgcgagcgccgc
cagcaggagatcgtgcgcaaggtctcgccggacctgcgccgtatcgccggcgtcaacgcc
tatgccaacaatccgccctcgctcggcgcctccaacaattcgcgcccgatcgaatatgtg
ctgcagacctccggcacctatgagcagctcgacgaatatgtgaaccgcttcctggagcgc
attcacgactatcccggccttgccagcgtcgagaccgacctcaagctgaacaagccggaa
atctccatcaccatcgaccgcgccaaggcggcggacctcggcatcgatgtcgccgtgctt
ggccgcacgctggagagcctgctcggcggccggcaggtgacacgcttcgaggtcggcggc
gagcaatatgacgtcatggtgcagctcgacgcccgcgaccgcgcctcgcccggcacgctc
gacaccatctatctgcgctcaagcggcgggcagatggtgcagctcaacaacctcgtcaat
gtacgcgagaccgtggcgccgcaggaattgcgccgcttcaaccagctgcgctccgccacc
atctccgccaacctcgcccccggctatgcccagggcgatgcgctcgccttcctcgaccag
gcggcgcacgacgtgctgccgcagaccgtgcagaccgacgtctccggccaactgcgcgaa
ttccgctccgccggccagagcctggtgctggtgttcatactggcgctgggcttcatctat
ctggtgctctcggcgcagttcgagagcttccgcgacccggtcatcatcatgctgacggtg
ccgctctccatgaccggggcgctggcggcgctgtatttctccggcggcacgctgaacgtc
tattcgcagatcggcctcgtcacgctggtcggcctgatcaccaagcacggcatcctgatc
gtcgaattctccaaccagcagcaggaggccgggctcgaccggcgcgccgcggtgatagag
gcggcggtgctgcgcctgcgtccgatcctgatgaccaccggtgccatggtgctgggggcc
atgccgctggccttcgccgacggcgccggcgccgagagccgcgcgcagatcggctgggtc
atcgtcggcggcatgagcctcggcacgctgctgacgctgttcgtggtgccgacggtctat
tcgctgatcggccgcattcaccgcgagagcgtggtggacgcacatgccgcggggcatcac
gcaccggcggagtga
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integrated database retrieval system
