Spongiibacter taiwanensis: NCG89_01165
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Entry
NCG89_01165 CDS
T08367
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw00270
Cysteine and methionine metabolism
staw00450
Selenocompound metabolism
staw00670
One carbon pool by folate
staw01100
Metabolic pathways
staw01110
Biosynthesis of secondary metabolites
staw01230
Biosynthesis of amino acids
staw04980
Cobalamin transport and metabolism
staw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NCG89_01165 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NCG89_01165 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCG89_01165 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCG89_01165 (metH)
04980 Cobalamin transport and metabolism
NCG89_01165 (metH)
Enzymes [BR:
staw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
NCG89_01165 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
ComA
Motif
Other DBs
NCBI-ProteinID:
USA43411
LinkDB
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Position
complement(216619..220317)
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AA seq
1232 aa
AA seq
DB search
MTDAINRSELLLNALKERILIIDGAMGSMLQSYKLSEADYRGERFADYHRDLKGNNDLLT
LTQPQVVREIHQAYLDAGADLIGANTFNATAISQQDYELGDIAEELSEAGVRLAREVADA
ETARNPAKPRFVAGILGPTPRTASISPDVNDPGARNITYDQLVADYYASTRGLVNGGSDI
ILIETVFDSLNAKAAVFAVLQYFEDTGIELPIMVSVTFPDVSGRTLSGQTPKAFWNSIAH
AKPLIVGSNCGRRFSEIRPFVEELADAADCYFSGHFNAGLPNEFGEYDETPEDMHDELRD
FAQRGYLNLIGGCCGTTPAHIEAIAKAVDGAAPRPLPQHAPKCRLAGLEPFEIGPETLFV
NVGERCNVTGSAVFKRLILENDFDAALSVARQQVENGAQIIDINMDEGMLDAEKAMVTFL
NLIASEPDISRVPIMVDSSKWAVIEAGLKCIQGKPIVNSISLKEGEEEFRAHARQCLKYG
AAVVVMAFDEAGQADNLQRRKDICQRSYDILVNEIGFPPQDIIFDPNIFAVATGIEEHNN
YAVDFIEATAFIRQALPHALISGGVSNVSFSFRGNNPVREAIHSVFLYHAIKAGMDMGIV
NAGQLAIYDDLPELLRERVEDVILNRRDDATERLLEIADQFKGDGTAGPAKEDLSWRELP
VEKRIEHALVKGIADYIEEDTEEARLQAAKPIDVIEGALMDGMNVVGDLFGDGKMFLPQV
VKSARVMKQAVAYLNPFIEAGKEVGAKANGKVLMATVKGDVHDIGKNIVGVVLQCNNFEV
IDLGVMVPCEKILETAKQENVDIIGLSGLITPSLDEMVHVASEMQRLGLSVPLMIGGATT
SKAHTAVKIEPKYQNDGTVYVPDASRSVSVASQLISKDLKAAFVQEQREDYERVRARRAG
RQGKTRLLGYEDACKRAFTTDWASYTPPEPAFLGLREFIDYPLETLRETIDWTPFFISWG
LAGKYPRILSDDTVGEAATNLFNDAQKMLDEIIANGSLKAKGVIGFWPAQRVGSDDVAVM
DPEDGHTLATLHHLRQQAVKPDDKPQMSLADYIAPEGLGVKDYVGGFAVTTGIGAEELAK
AYEAKGDDYNSIMVKALADRLAESFAEHLHKRVRTEFWAYAPDEQLSNEELIKEAYRGIR
PAPGYPACPDHTEKETLFKLLDASARTGISLTEHLAMFPAASVSGFYYSHPQARYFAVGK
INKEQVADIAKRKGMELKAMEKWLSPNLDYDP
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgatcaatcgtagcgaattgctgcttaatgccctcaaagaacgaatttta
atcatcgacggggcgatgggcagcatgctgcagagctacaaactctccgaagcggattat
cgcggtgagcgtttcgcggattatcaccgcgacctgaaaggcaacaacgacctgttgacc
ctgacccagccgcaagtggtgcgggaaatccaccaggcctacctcgatgcgggcgccgat
ctgatcggcgccaataccttcaacgccacggctatctcccagcaggattacgaactcggc
gacatcgccgaagagctgagcgaagcgggtgtgcgactggcccgggaagtggccgatgcc
gaaaccgcccgcaaccctgccaaaccacgctttgtggcaggcattctcggcccgacaccc
cgtactgcgtccatctcccccgatgtcaatgatccgggcgcccgcaatatcacctacgat
cagctcgttgccgattactatgcgtcgacccgcggcctggtcaacggcggcagcgatatt
attttgatcgaaacggtatttgacagtctcaacgccaaggctgcggtctttgcggtgctg
cagtactttgaggacaccggtattgagctgccaattatggtctcggtgacctttccagac
gtcagtggccgcaccctgtcggggcagacacccaaggcattctggaactccattgcccac
gcaaaaccccttatcgtcggcagtaattgtggtagaagattcagtgagatacggccattt
gttgaggaactggctgatgcagctgactgctacttcagcggccacttcaatgctggtctc
cccaacgagtttggcgaatacgatgaaacccccgaggacatgcacgacgagctgcgcgac
tttgcccagcgcggctacctcaacctgatcggcggctgttgcggtaccacacccgcccac
atcgaggccatcgcaaaagccgttgacggcgccgcgccgcgccccctgccccagcatgcg
cccaaatgccgcttggccgggctcgagcccttcgaaatcggccccgagaccctgtttgtc
aatgtcggcgagcgctgcaacgtgacgggatccgccgtgttcaagcgtttgattctggaa
aatgactttgacgcagcgttgtcggtggctcggcagcaggtggaaaacggcgcccagatc
atcgacatcaacatggatgaaggcatgctcgatgccgagaaggccatggtgacctttctc
aatctgatcgcctctgagcccgatatctcccgggtgccgatcatggtggattcgtccaaa
tgggcggttatcgaagcgggcttgaagtgcattcagggcaagccaatcgttaactcgatc
tccttaaaggaaggcgaggaagagttccgcgcccacgcgcggcagtgtctgaaatacggt
gcagcggtggtagtgatggccttcgacgaggccggccaagccgataatctccaacggcgc
aaagatatctgtcagcggtcctacgacattctggtaaatgaaatcggctttccgccccag
gacattatcttcgacccgaacatctttgcggtggccactgggatcgaagaacacaacaac
tatgccgtggacttcattgaagccaccgcctttattcgtcaagccctgccccacgcgctg
atctccggcggggtctctaacgtgtcgttttctttccggggcaataacccggttcgggaa
gcgattcactcggtatttctttaccacgcaatcaaagccggcatggatatgggtatcgtc
aacgccggccagttagcaatttacgatgatctacccgagctgctgcgcgagcgggtggag
gacgtgattctcaaccgccgggatgatgccacggagcgcctgctcgagatcgccgaccag
ttcaaaggcgatggcaccgccggccctgccaaagaagatctcagctggcgggaattaccg
gtagaaaaacgcatcgagcatgccctggtaaaagggattgccgattacattgaagaggat
accgaggaagcacgcctgcaagcggccaagcccattgatgttatcgagggtgcgttgatg
gacggcatgaatgtggttggcgacctgttcggcgacggcaagatgttcctccctcaggtc
gtcaagtcggcgcgggtaatgaaacaggcggtggcctacctcaacccctttatagaagcg
ggcaaggaagtgggtgccaaggccaacggcaaagtactgatggctaccgtgaaaggcgac
gttcacgatattggcaagaacattgtcggcgtcgtgctgcagtgcaataactttgaggta
atcgaccttggggtaatggtgccctgcgaaaaaatcctcgaaaccgccaaacaggaaaac
gttgatattattggcctgagcggactgattacgccgtcactggatgaaatggtccacgtg
gccagcgaaatgcagcgactggggttgtcggtgccattgatgattggtggcgccaccacc
tctaaagcgcacacggcggtaaaaatcgagcccaagtatcagaacgacggcaccgtgtat
gtaccggacgcatcacgcagtgtgtcggttgccagtcagctgatcagcaaggacctcaag
gcggcgtttgttcaggagcagcgagaggactacgaacgggttcgcgcgcgccgggctggt
cgccagggcaaaacgcgcctgctcggttacgaggacgcctgcaaacgggcgttcaccacc
gactgggcgagctataccccaccggagccagccttcctcggcctgcgcgaatttatcgat
tacccgctggaaaccctgcgggaaacgatcgactggacgccctttttcatctcctggggc
ttggcgggcaagtaccctcgcattctcagcgacgatactgtgggtgaagcggccaccaac
ctgtttaacgacgcacaaaaaatgctcgatgagatcatcgccaacggcagcctcaaggcg
aaaggcgtcatcggtttttggcccgcacagcgagttggcagcgacgatgtggcggtgatg
gatcccgaggatggtcataccctggccaccctgcaccaccttaggcaacaggccgttaaa
cccgatgataaaccgcaaatgagcctggcggattacatcgcccccgaagggcttggtgtg
aaagactatgtgggtggctttgccgttaccacggggattggcgcggaggaactggcaaaa
gcctacgaggccaagggtgacgattacaattcgattatggtcaaggccctggcagaccga
ctggccgagtcctttgccgagcatttgcacaagcgcgtgcggaccgaattctgggcctat
gcgccggacgagcaactcagtaacgaggagctgatcaaggaagcctaccggggcattcgc
cctgcgccgggctaccctgcctgcccagaccacaccgaaaaggaaaccctgttcaagctg
cttgatgccagtgctcgcaccgggatcagcctgaccgagcatctggccatgtttccggcg
gcatcggtgagcggattttactattcgcaccctcaggcgaggtattttgccgtgggtaaa
atcaacaaggagcaggtcgcagatattgccaagcgtaagggcatggagctcaaggcaatg
gagaaatggctgtcacccaatctggattacgatccctga
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