Spongiibacter taiwanensis: NCG89_12460
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Entry
NCG89_12460 CDS
T08367
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
staw
Spongiibacter taiwanensis
Pathway
staw01501
beta-Lactam resistance
staw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCG89_12460
01503 Cationic antimicrobial peptide (CAMP) resistance
NCG89_12460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
staw03036
]
NCG89_12460
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
staw02000
]
NCG89_12460
01504 Antimicrobial resistance genes [BR:
staw01504
]
NCG89_12460
Chromosome and associated proteins [BR:
staw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NCG89_12460
Transporters [BR:
staw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NCG89_12460
Antimicrobial resistance genes [BR:
staw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NCG89_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
CzcB_C
BSH_CusB
BSH_RND
BSH_CzcB
Biotin_lipoyl
BSH_ALG44
CCDC90-like
BSH_YknX
BRE1B
YodE
Motif
Other DBs
NCBI-ProteinID:
USA42336
LinkDB
All DBs
Position
complement(2714382..2715452)
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AA seq
356 aa
AA seq
DB search
MTLTVWQRGLIATALLVSTASATAGDPVPVTAVQPEKAQLGETLRLSGSVTALRRAALSA
RVDGLVKDILVEPGAAVTQGQALLRQDAALAQLDHQQALAARDEAAAAQREASRLLREAE
RLRADNHISENEVNIRRASLAQADAALAAGQARANLTKEVVARHDLLAPFDGVISQRLVD
SGEWLSRGSPAFELVSLDPVLVDVSVPQERYADIRPDTAVRLCPDTRPGQCLPGKVAAII
PLGDSSARAFRVRLAATGDNDGLLPGSSAAVEFTLGDTGTPQLVISRDALLRHPDGRYSV
FVANNGTASRRNVTLGRESAGKVIVRTGLAEGDRVIVRGNELLSEGQAISITNGAD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcacagtttggcagcgcggcctcattgcgaccgcactccttgtctcgacagcc
tccgccaccgctggcgaccccgttccggtaaccgcggtccagccggaaaaagcccagctc
ggtgagaccctgcgcttgtcgggttcagtcaccgcactgcgccgcgcagccctgtcggcc
agagtcgacggtctggtaaaagacattctggttgaaccgggcgccgccgtaacccagggc
caggccctcctgcgccaggacgccgcactcgcccagctcgaccaccagcaagcgctggcc
gcccgggacgaagcggcggccgcccagcgcgaagccagccgtttgttgcgagaagccgag
cggctgcgcgctgacaaccacatttctgaaaatgaagtgaatattcgccgggcaagtctg
gcccaggccgacgctgccctggccgccggccaggcccgggccaacctgaccaaagaagtg
gtggcgcgccacgacctgctggcgccctttgatggggtcatcagccaacgcttggtggac
agcggcgaatggctcagccggggcagcccggcctttgagctggtatcgctagacccggtg
ctggtcgacgtgagtgtgccccaagagcgctacgcggatatccgcccagacaccgccgtt
cgcttgtgcccggatacccgtccgggccaatgcttgccgggcaaggtggcagccatcatt
ccgctgggagacagcagcgcccgggcctttcgtgtgcgactggcggccaccggtgacaac
gacgggctgctgcccggcagctctgccgccgtcgagttcactctgggcgacaccggcacg
ccccagctggtgatttcccgcgatgctttgctgcgccacccggatggccgctacagcgtc
tttgttgccaacaacggcaccgccagccgccgcaacgtcactttaggcagggaatcggcc
ggcaaggtcattgtccgcaccggcctggccgagggcgaccgggtcatcgtgcgcggcaac
gagctgctcagcgaaggccaggccatttccatcaccaacggggccgactga
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