Spongiibacter taiwanensis: NCG89_15715
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Entry
NCG89_15715 CDS
T08367
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
staw
Spongiibacter taiwanensis
Pathway
staw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCG89_15715 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
staw03400
]
NCG89_15715 (nth)
Enzymes [BR:
staw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCG89_15715 (nth)
DNA repair and recombination proteins [BR:
staw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCG89_15715 (nth)
Prokaryotic type
NCG89_15715 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
DUF5797
DUF3349
Motif
Other DBs
NCBI-ProteinID:
USA42973
LinkDB
All DBs
Position
complement(3467687..3468340)
Genome browser
AA seq
217 aa
AA seq
DB search
MLKADRVAFIQRRLDELYPEQPIPLDHKDPYTLLVAVLLSAQCTDERVNQVTPALFALAD
NPFDMAQQDVDKIREIIRPCGLSPQKSKAIKRLSEILVEQHNGVVPQDWDALEALPGVGH
KTASVVMSQAFGVPAFPVDTHIHRLAQRWGLSSGKNVAQTEKDLKRLFARDKWNSLHLQI
IYYGREFCSARGCDGTVCEICTTCYPERKSPKKTKKA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaaggcagatcgcgtcgcctttattcagcggcgcctcgacgaactctatcccgaa
cagcccatcccgctggaccacaaagacccctacacccttttggtggcggtgttgctgtcg
gcccagtgcaccgacgagcgggtgaatcaggtgacccctgccctgttcgctctggccgac
aaccccttcgatatggcccagcaggacgtggataaaatccgcgagatcatccgcccctgc
ggcctgtcaccgcaaaaatccaaggccatcaaacggctgtcagaaattctggtggagcaa
cacaacggcgtggtgccccaggactgggacgcactggaagctctccccggggtgggccac
aaaactgccagcgtggtgatgtcccaggcctttggtgtgccggcgtttccggtagacacc
cacattcaccgcctggcccagcgctggggcctgagcagtggcaaaaatgtggcgcaaacc
gaaaaagacctgaagcgcctgtttgcccgggataaatggaatagcctgcatttgcagatt
atttactacggtcgcgagttctgcagcgcccggggctgcgacggcaccgtctgtgaaatc
tgtaccacctgctatcccgaacgaaaatctccgaagaaaaccaaaaaagcctga
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