Streptomyces sp. BRB040: ABDE16_25920
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Entry
ABDE16_25920 CDS
T11010
Name
(GenBank) endonuclease/exonuclease/phosphatase family protein
KO
K18353
vancomycin resistance protein VanJ
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr01502
Vancomycin resistance
stbr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABDE16_25920
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ABDE16_25920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
stbr01504
]
ABDE16_25920
Antimicrobial resistance genes [BR:
stbr01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
ABDE16_25920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XAR13059
LinkDB
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Position
5842048..5843100
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AA seq
350 aa
AA seq
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MAQQAYMTETDSGGSEPERRQNRIRRLLGRAVSGWRGDRRIWRRGLVTAAVAVLLSGVMA
AHSHIPNAIGNLGSLTETFLPWFGLLIPVLLAIALVRKSATALIALVLPVSVWLNLFGGL
LFDKTGSGGDLTVATHNVNADNADPAGTARAVAAAGADVMALEELKASAVPTYEKALAVK
YPHHAVVGTVGLWSKYPISGVKPVDIELGWKRAMRATVATPSGPIAVYVAHLPSVRVKLE
AGFTARQRDKSADALGEAIADEKLPRKILLGDLNGTMNDRSLTAITSQLRSPQGAVGDGF
GFSWPASFPMARIDQILVTGVEPMTSWTLPATGSDHLPIAARVKVDTTAS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggcgtacatgacggagacggacagcggcggctcggagcccgagcgccgg
cagaaccggattcggcgcctgctcggccgggcggtcagcggctggcgcggcgaccggcgg
atctggcgccggggcctggtcaccgccgccgtcgcggtcctcctgtccggcgtcatggcg
gcccactcgcacatcccgaacgccatcggcaacctcggcagcctcaccgagaccttcctg
ccgtggttcggtctgctgatccccgtcctgctggcgatcgccctggtccgcaagtcggcg
acggcgctgatcgcgctggtgctgccggtgagcgtgtggctcaacctcttcggcggcctg
ctcttcgacaagaccggctccggcggcgacctcacggtggccacgcacaacgtcaacgcc
gacaacgccgacccggcgggcaccgcccgcgcggtggccgccgccggtgcggacgtgatg
gccctggaggaactgaaggcgtccgccgtaccgacgtacgagaaggcgctggcggtgaag
tacccgcaccatgcggtggtcggcaccgtcgggctgtggagcaagtacccgatcagcggc
gtgaagccggtcgacatcgaactgggctggaagcgcgcgatgcgcgccaccgtcgccacg
ccctccggaccgatcgccgtctacgtcgcccacctgccctccgtacgggtgaagctggag
gccggtttcaccgcgcggcagcgggacaagagcgccgacgccctcggcgaggccatcgcc
gacgagaagctgccccgcaagatcctgctcggcgacctcaacggcaccatgaacgaccgc
tcgctcaccgcgatcacctcccagctgcgctccccgcagggcgccgtgggcgacggcttc
ggcttcagctggccggcgtccttcccgatggcccgcatcgaccagatcctggtcaccggc
gtcgaacccatgacgagctggaccctcccggcgaccggcagcgaccatcttccgatcgcc
gcgcgtgtgaaggtcgacacaacggcttcctag
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