Streptomyces sp. BRB040: ABDE16_31865
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Entry
ABDE16_31865 CDS
T11010
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABDE16_31865 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stbr03400
]
ABDE16_31865 (nth)
Enzymes [BR:
stbr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABDE16_31865 (nth)
DNA repair and recombination proteins [BR:
stbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABDE16_31865 (nth)
Prokaryotic type
ABDE16_31865 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HC2
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XAR14179
UniProt:
A0AAU6XQR4
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All DBs
Position
7131161..7132543
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AA seq
460 aa
AA seq
DB search
MSRGTRQGSNWAPIFEVRGGCRCRAVGWPGVQIAGESTGLGAARVSARRDSAVGEQGPDG
GRKPAKATKKAVPAKRVTAEKGAVKKSSASKETAASRKAAAGKKTAAKEAEGKKAEGKKT
PAKKTAAAKTPAKEAAAKKAAAGKTVAKETVAGRTVAKKAAAKKAAPLKRQAPAKKPAVA
PKKAAAAVKGVAPAKTVAPTSPRGESRTALVRRARRIDRELAEVYPYAHPELDFENPFQL
VVATVLSAQTTDLRVNQTTPALFAKYPTPEDLAAAVPEEVEEILRPTGFFRAKTRSVIGL
SKALTEDFGGEVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWRWTE
ETDPDKIEAAVGALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGEGETD
PEKAKKLLKYEKGGFPGQRLKPPRAYLDAGGKPALPLGAG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggtacgcggcaggggtccaattgggcgccgatcttcgaggtccggggcgga
tgtcggtgccgggccgtaggctggccgggtgtccaaatcgccggtgagagcacaggcctg
ggggctgcgcgagtgagtgcacggcgcgattccgctgtgggcgaacagggtcccgatggc
ggtaggaaaccggcgaaagcgacgaagaaggcagtgcctgccaagagggtgactgcggag
aagggtgccgtgaagaagtcctccgcgagcaaggagaccgccgcgagccggaaggcggcc
gcgggcaagaagaccgcggcgaaggaggccgaggggaagaaggccgaggggaagaagacc
ccggcgaagaagaccgcggcggcgaagaccccggcgaaggaggccgcggcgaagaaggcc
gccgccggtaagacggtcgccaaggagaccgtcgccggcaggacggtcgccaagaaggcc
gccgccaagaaggccgcgcccctcaagcggcaggctccggccaagaagcccgccgtcgcc
ccgaagaaggccgccgcggccgtcaagggcgtcgccccggcgaagaccgtcgccccgacc
tcgccgcgcggcgagtcgcgcaccgcgctggtccgccgcgcccgccgtatcgaccgcgag
ctcgccgaggtctacccgtacgcccacccggagctggacttcgagaacccgttccagctg
gtcgtggccacggtgctgtccgcgcagaccaccgacctgagggtcaaccagacgacgccc
gccctcttcgccaagtaccccacccccgaggacctggccgccgccgtccccgaggaggtc
gaggagatcctgcgcccgaccggcttcttccgggccaagaccaggtcggtcatagggctg
tccaaggcgctcacggaggacttcggcggcgaggtccccggacgcctcgaagacctcgtc
aagctgcccggcgtcggccgcaagaccgccttcgtcgtgctcggcaacgcgttcggccgc
cccggcatcaccgtggacacccacttccagcgcctggtgcgccgctggcggtggaccgag
gagaccgacccggacaagatcgaggccgccgtcggcgcgctcttcccgaagagcgactgg
accgacctctcccaccacgtgatctggcacggccgccgcatctgccacgcccgcaagccc
gcctgcggcgcctgccccatcgccccgctgtgcccggcgtacggcgagggcgagacggac
ccggagaaggcgaagaagctgctcaagtacgagaagggcggcttccccggccagcggctg
aagcccccgcgggcgtacctggacgcgggcgggaagccggcactcccgctgggggccggg
tga
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