Streptococcus thermophilus CNRZ1066: str1220
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Entry
str1220 CDS
T00212
Symbol
nth
Name
(GenBank) endonuclease III, DNA repair
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
stc
Streptococcus thermophilus CNRZ1066
Pathway
stc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
str1220 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stc03400
]
str1220 (nth)
Enzymes [BR:
stc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
str1220 (nth)
DNA repair and recombination proteins [BR:
stc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
str1220 (nth)
Prokaryotic type
str1220 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
AF1548-like_C
Transposase_20
HHH_8
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
AAV62765
LinkDB
All DBs
Position
complement(1071478..1072137)
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AA seq
219 aa
AA seq
DB search
MGWSIMLGRKRVNEALALMGKMFPDAHGELEWETPFQLLVAVILSAQTTDKAVNKVTPGL
WARYPEIEDLASANLNDVEMCLRTIGLYKNKAKNIIKTARAILMNFDGQVPKTHKELESL
PGVGRKTANVVLAEVYGIPSIAVDTHVSRVSKRLNIAPENASVEEIEAELMKKIPKKDWI
ISHHRMIFFGRYHCLAKNPKCQTCPLQRYCEYYRETTKK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtggggtggtcaataatgttgggtagaaaacgtgttaatgaagctctggccttaatggga
aagatgtttccagatgcacatggtgagctggagtgggagactccctttcaactactagtt
gctgttattttatctgctcaaacaactgacaaagctgttaataaggtaacaccgggtttg
tgggcccgttatccagaaattgaagatttagcatctgctaatcttaatgatgttgaaatg
tgcttaagaaccattgggctatataagaataaggcaaagaatatcatcaaaactgctaga
gctattttaatgaatttcgacggacaagttcccaaaactcacaaggaattagagagtcta
cctggtgttggacgaaaaacagctaacgtcgtattggctgaagtctatggtattccgtct
attgctgtagatacacatgtctctcgcgtttctaaacggctgaatatagctccagaaaat
gctagtgtagaggaaatcgaagcagaattgatgaagaaaataccaaagaaagattggatt
atcagtcatcaccgcatgattttctttggacgctatcattgtttagcaaagaatcctaaa
tgccagacttgtcctcttcaaaggtactgtgagtattatcgagaaacaactaagaaataa
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