Streptomyces sp. CMC78: SCMC78_48200
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Entry
SCMC78_48200 CDS
T11197
Name
(GenBank) endonuclease/exonuclease/phosphatase family protein
KO
K18353
vancomycin resistance protein VanJ
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm01502
Vancomycin resistance
stcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCMC78_48200
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SCMC78_48200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
stcm01504
]
SCMC78_48200
Antimicrobial resistance genes [BR:
stcm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SCMC78_48200
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BFP55013
UniProt:
A0AB33KMZ3
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All DBs
Position
complement(5341090..5342004)
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AA seq
304 aa
AA seq
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MLAGLAVVVAGGLAFHRVVPNSPGRVGSLLESFLPWVGVLVVVLVVVALVRRSAVALVAL
LLPVGAWVHLFGGLLLPAEEAGGRKLVVVQHNASDENRDPAGTARALIGAAADLIALEEL
VVPQLAAYEKALAADYPHHVVRGTVGLWSKHPLSGERLVDIRPPSIEEGWSRGVRAVVHS
PYGDVAAYVAHLPSVRVGAGGLASQRRDESAALLGRAIADESVETVILLGDLNGAVEDRG
LSPLTSQLDVAESGFAFSFPAAFPLARIDQVMARSATVGHIRTLSATGSDHLPVVARVVL
PGHR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccgggctcgctgtggtcgtggccggggggctggcgttccatcgggtcgtaccc
aattcgcctggacgggtcggcagtctgctggagtcctttctgccctgggtcggcgtcctc
gtagtcgtgctggtggtcgtcgccctcgtgcggcggtccgccgtcgcgctggtggcgctg
ctgctgcccgtgggggcctgggtgcatctcttcggcgggctgttgctgcccgccgaagag
gccggcgggcgcaagctcgtcgtcgtacagcacaacgccagtgatgagaaccgcgatccg
gcgggtaccgcccgtgcgctcatcggggccgcggccgacctcatcgcgctggaggagttg
gtggtcccgcagttggcggcgtacgagaaggccctcgccgccgactatccgcatcacgtc
gtccgaggcaccgtcgggctgtggtccaaacacccgctcagcggtgagcggttggtggac
atcaggcccccgagcattgaggaggggtggagtcgtggtgtgcgtgccgtggtccactcc
ccgtacggagacgtcgcagcgtacgtcgcccacctcccctccgtccgggtcggcgcgggc
gggctcgcctcccagcggcgagacgagagcgccgcgctgctggggcgcgccatcgcggac
gaaagcgtcgagaccgtcattctgctcggggatctcaacggggctgtggaggaccggggg
ttgagccccctcacctcacagttggacgtcgccgagagcgggttcgccttcagcttcccc
gccgccttcccgctggcccggatcgaccaggtcatggcccgctccgccaccgtcggccac
atccgcaccctgtccgccaccggcagcgaccatctgcccgtcgtcgcccgggtcgtcctg
ccgggccatcggtga
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