Streptomyces sp. CMC78: SCMC78_54420
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Entry
SCMC78_54420 CDS
T11197
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm00860
Porphyrin metabolism
stcm01100
Metabolic pathways
stcm01240
Biosynthesis of cofactors
stcm03030
DNA replication
Module
stcm_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SCMC78_54420
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCMC78_54420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcm03032
]
SCMC78_54420
Enzymes [BR:
stcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
SCMC78_54420
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SCMC78_54420
DNA replication proteins [BR:
stcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SCMC78_54420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
BFP55635
UniProt:
A0AB33KSJ0
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Position
6043138..6044490
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AA seq
450 aa
AA seq
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MSVARQVVVEADGGSRGNPGPAGYGAVVIDPATGEPLAEAAEYIGVATNNVAEYRGLIAG
LEAAKALFPDAGDALRVHVRMDSKLVVEQMSGRWKIKHPDMKPLAARAAAILPPSSVTYE
WIPRAQNKHADRLANEAMDAGRDGRQWEASASTAALDAPSARTPIASPPVQGPPGDQAAG
AAKARAALAAARGAATPEGLFPLPEAAVPEPAAPETAAAPEAAGSGPEAAGAPQTGWGAA
PDLGAPATLVLLRHGETALTPEKRFSGSGGTDPELSATGRGQAERAAEHIAALGTVQDIV
SSPLRRCRETAAAVAARLGLDVRIDEGLRETDFGAWEGLTFTEVRERYGDDLTAWLASPD
TAPTGGGESFAEVTERVAAARDRIVARYAGRTVLLVTHVTPIKTLVRLALGAPPESLFRM
ELSAASISTVAHYGDGNASVRLLNDTSHLR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgcccgccaggtggtggtcgaggccgacggcggctcccggggcaatccgggg
cccgccggttacggcgcggtcgtcatcgacccggccaccggcgagccgctcgccgaggcc
gccgagtacatcggcgtcgccacgaacaacgtcgccgagtaccggggcctgatcgccggt
ctggaggccgcgaaggcgctgttcccggacgcgggtgacgcgctgcgggtccacgtccgg
atggactccaagctggtcgtcgagcagatgtcggggcgctggaagatcaagcaccccgac
atgaagccgctggccgcccgcgccgccgcgatcctgccgccgtcctccgtgacgtacgag
tggatcccgcgcgcccagaacaagcacgcggaccggctggccaacgaggcgatggacgcg
ggccgcgacggcaggcagtgggaggcgtccgcctccacggccgccctggacgccccgtcc
gcccgcaccccgatcgcttcgccgccggtgcagggcccgcccggcgaccaggccgcgggc
gcggccaaggcccgcgcggcgctggcggccgcacgtggcgcggcgaccccggaggggctt
ttcccgctgccggaggcagcggttccggagccggccgcgccggagacagcagccgcgccg
gaggcggccggaagcggtcccgaggccgctggagcaccgcagaccggctggggcgcggcc
cccgacctgggcgcgcccgccacgctcgtcctgctccggcacggcgagaccgccctcacg
cccgagaagcggttctccggcagcggcggcaccgaccccgagctctccgccaccggccgg
ggccaggccgaacgggccgccgagcacatcgcggccctgggcaccgtccaggacatcgtc
agctccccgctgcgccgctgccgcgagaccgccgcggccgtcgccgcccggctcggcctg
gacgtccggatcgacgagggcctgcgcgagacggacttcggcgcgtgggaggggctgacc
ttcaccgaggtacgggagcggtacggcgacgacctcaccgcctggctcgcctctccggac
accgccccgaccggcggcggcgagagcttcgcggaggtcaccgagcgggtcgcggccgcc
cgggaccggatcgtcgcccggtacgcgggccgcacggtcctgctcgtcacccatgtgacc
ccgatcaagacgctcgtccggctcgccctgggagccccgccggagtcgctgttcaggatg
gagctgtcggcggcctcgatctccacggtcgcccactacggcgacggcaacgcctccgta
cgcctgctcaacgacacctcgcacctgcgctag
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