Streptomyces tendae: F3L20_25060
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Entry
F3L20_25060 CDS
T09112
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
stee
Streptomyces tendae
Pathway
stee00860
Porphyrin metabolism
stee01100
Metabolic pathways
stee01240
Biosynthesis of cofactors
stee03030
DNA replication
Module
stee_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
stee00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
F3L20_25060
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F3L20_25060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stee03032
]
F3L20_25060
Enzymes [BR:
stee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
F3L20_25060
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
F3L20_25060
DNA replication proteins [BR:
stee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
F3L20_25060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
QER88688
UniProt:
A0A5P1YP94
LinkDB
All DBs
Position
complement(5442094..5443602)
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AA seq
502 aa
AA seq
DB search
MREFVVEADGGSRGNPGPAGYGAVVSDAATGETLAEAAEYIGVATNNVAEYRGLLAGLRA
ARDLDPEAGVHVRMDSKLVIEQMSGRWKIKHPAMKPLAAEAATVFPPGQVTYEWIPRERN
THADRLANEAMDAGKRGEQWSPAASRADLDTPSAVPAPEGPPGDATAGAARVRAAMTPTA
AGRAAEARAARAAETADRPPAPGGDADGPASTGRATESRDAGTSAERPAAGARSGGPGSS
AAHRPVTDTPASGAGARAGASGGDAGLAAVAGADADRRAAQAVATPSSGWAPADMGAPAT
FVLLRHGETPLTPQKRFSGSGGSDPSLSDIGREQAEKVAAALARRGTVQAVVASPLARTR
ETARIVAARLGLDVAVEEGLRETDFGAWEGLTFGEVRERHPEDLNAWLASPDVEPTGGGE
SFAATAARVAEARDTLLAAYRGRTVLLVTHVTPIKTLIRLALGAPPEALYRMELSAASLS
AVAYYADGNASVRLFNDTSHLR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagttcgtcgtcgaggcggacggcgggtcacggggcaaccccgggcccgccgga
tacggcgccgtggtgagtgacgcggcgacgggggagacgctggccgaggcggccgagtac
atcggcgtcgccacgaacaacgtcgccgagtaccgggggctgctggccggcctgcgcgcc
gcccgcgacctggacccggaggccggggtccacgtccggatggactccaagctcgtcatc
gagcagatgtcgggccgctggaagatcaagcacccggcgatgaagccgctcgcggcggag
gcggcgacggtcttcccgccggggcaggtcacctacgagtggatcccgcgcgaacgcaac
acccacgcggaccgtctggccaacgaggcgatggacgcgggcaagcggggcgagcagtgg
tcgcccgccgcgagccgcgccgacctggacacgccctcggccgtaccggccccggagggg
ccacccggcgacgcgacggcgggagcggcccgcgtccgcgcggcgatgacgccgacggcg
gccggccgtgcggcggaggcccgtgcggcccgtgcggcggagaccgccgaccggcctccc
gccccgggtggtgatgccgacggtccggcgtcgacgggccgggcgacggagagccgtgac
gcgggcacctccgccgagcgccccgcggccggtgcccggtccggtgggccggggtcgtcc
gccgcgcaccgtccggtgacggacacccccgcgtccggcgcgggtgctcgcgccggcgcg
tccggtggggacgcgggcctcgcggccgtcgcgggtgccgatgccgatcggcgggccgct
caggccgtggccacgccctcctccggatgggcgcccgccgacatgggcgcgcccgccacc
ttcgtgctgctgcggcacggcgagaccccgctcaccccgcagaagcgtttctcgggcagc
ggaggcagcgacccctccctctccgacatcggccgtgagcaggccgagaaggtcgccgcc
gcgctcgcccggcgcggcaccgtccaggcggtcgtcgcctcccctctcgcccgtacccgc
gagacggcccggatcgtcgccgcccgcctcggcctggacgtggccgtggaggaggggctg
cgcgagaccgacttcggcgcctgggagggcctcaccttcggcgaggtgcgcgaacgccac
cccgaggacctgaacgcctggctggcctcgccggacgtcgaacccaccggcggcggggag
agcttcgcggccaccgccgcccgggtcgcggaggcccgcgacacactgctcgcggcgtac
cggggccgtacggtcctgctggtgacgcacgtgaccccgatcaagaccctgatccggctc
gcgctcggtgccccgcccgaggcgctgtaccgcatggaactgtccgcggcctcgctgtcc
gccgtggcgtactacgccgacggcaacgccagcgtccgcctgttcaacgacacgtcacac
ctgcggtag
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