Stenotrophomonas sp. SBJS02: FQS62_007490
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Entry
FQS62_007490 CDS
T10678
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FQS62_007490 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stej03400
]
FQS62_007490 (nth)
Enzymes [BR:
stej01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FQS62_007490 (nth)
DNA repair and recombination proteins [BR:
stej03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FQS62_007490 (nth)
Prokaryotic type
FQS62_007490 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WAP03327
LinkDB
All DBs
Position
complement(1584088..1584780)
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AA seq
230 aa
AA seq
DB search
MATTKKTARAPARRGGTMPRADVVEMFTRLRELNPHPKTELEYSSPFELLVAVALSAQAT
DVGVNKATRRLFPVANTPAKILALGEDGLKQYIATIGLFNAKAKNVIATCAILLEKHGGE
VPRDRDELEALPGVGRKTANVVLNTAFGEPVMAVDTHIFRVSNRTGLAPGKNVRDVEDKL
VKVIPAEFLLDAHHWLILHGRYVCKARKPDCPGCVIADLCRFKEKTTAEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacgaagaagactgcacgcgccccggcgcggcgtggcggcacgatgccacgc
gccgacgtggtggagatgttcacccgcctgcgcgaactcaacccgcaccccaagaccgag
ctggaatacagctcgccgttcgagctgctggtagcggtagcgttgtcggcacaggccacc
gatgtcggcgtcaacaaggccacgcgccgtttgttcccggtggccaacacgccggcgaag
atcctcgccctgggggaagacggcctgaagcagtacatcgccaccatcggcctgttcaac
gccaaggcgaagaacgtgatcgccacctgcgcgatcctgctggagaagcacggcggtgaa
gtgccgcgcgatcgggatgaactggaagcgctgccgggcgtgggccgcaagaccgccaac
gtggtgctcaacactgcattcggtgagccggtgatggcggtggacacgcacatcttccgc
gtctccaaccgcaccggtctggcaccaggcaagaacgtgcgcgacgtggaagacaagctg
gtgaaggtgattccggccgagttcctgctcgacgcgcatcactggctgatcctgcacggg
cgttatgtgtgcaaggcgcgcaagccggattgcccgggctgcgtgatcgccgacctgtgc
cggttcaaggaaaagaccacggcggaggcgtga
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