Stenotrophomonas sp. MYb57: CLM74_03335
Help
Entry
CLM74_03335 CDS
T05384
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00300
Lysine biosynthesis
stem00550
Peptidoglycan biosynthesis
stem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CLM74_03335
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM74_03335
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stem01011
]
CLM74_03335
Enzymes [BR:
stem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CLM74_03335
Peptidoglycan biosynthesis and degradation proteins [BR:
stem01011
]
Precursor biosynthesis
Amino acid ligase
CLM74_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AVJ31884
LinkDB
All DBs
Position
749932..751440
Genome browser
AA seq
502 aa
AA seq
DB search
MSPSMLLSQLLPDVALAGHDPVLTGLVLDSRAVRPGNAFVAIAGFGAHGLGFVEQARAAG
AGAILFEAPAPAELPAPADAIAVPDLRARLGAMADQFHGAPSRAMTMVGVTGTNGKTSTV
QLLAQAWHLLGTPSGSIGTLGAGLYGAVEPTGFTTPLVLQMHALLAQLRDDGARAVAMEV
SSHALDQGRVDAVHYDVAVFTNLTRDHLDYHGDMASYGAAKARLFHRPGLKAAVINLDDA
FGRQLFAGLPAGVQAIGLSSRGADGASVRAEALQLDGRGIGFELVIDGQRAAVQSPLLGR
FNVDNLLAVAGSLHALGHPLPRIAEVLSALQPIRGRMNRLGGEDGLPTVVVDYAHTPDAL
EQALDSLHGHLQGTLFCVFGCGGERDTGKRPQMAAIAERLANQVIVTDDNPRGEDGDVIV
ADILAGFTDASAVTVQRNRARAIGLAVKRAGAGDIILIAGKGHEPYQEVNGVRHDFDDTE
VSAAALAAKAGVLAAETGEGAA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagcccttcgatgttgctttcgcagttgcttccggacgtggccctggcgggccatgat
cccgttctgaccggcctggtgctggacagccgtgccgtgcgccccggcaatgccttcgtt
gccatcgccggtttcggcgcgcatggcctgggttttgtcgagcaggcgcgtgctgccggt
gccggcgccatcctgttcgaagcgccggcgcctgccgagctgcctgcaccggccgatgcc
atcgccgtgccggacctgcgcgcgcgtctgggggcaatggccgaccagttccatggcgcg
ccttcgcgggcgatgaccatggttggcgtgaccggcaccaacggcaagacctccaccgtg
cagctgctggcccaggcctggcatctgctcggtacgcccagtggcagtatcggcacgttg
ggcgccggactttatggtgcggtcgagccgaccggtttcaccaccccgctggtgctgcag
atgcatgcgctgctggcgcagctacgcgacgatggcgcgcgcgcggtggcgatggaagtc
agctcgcatgcgctggaccagggccgcgtggatgcggtgcactacgacgtggcggtgttc
accaatctcacccgcgatcaccttgactaccacggtgacatggccagctacggcgcggcc
aaggcgcggctgttccatcgcccgggcctgaaggcggcggtcatcaatcttgacgatgcg
ttcggtcgccagctgttcgccggtctgccggcgggcgtgcaggccattggcctgagctcg
cgtggtgccgacggtgccagcgtgcgcgctgaagcgctgcagctggacggccgcggcatc
ggtttcgaactggtcatcgacggccagcgcgctgcagtgcagtcgccgctgctgggccgc
ttcaacgtggacaacctgttggccgtggccggcagcctgcatgcgctggggcatccgctg
ccgcgcatcgccgaggtgctgtcggcactgcagccgatccgtggccgcatgaaccgcctg
ggcggcgaagatggcctgccgaccgtggtggttgattacgcacacacccccgacgcgctg
gaacaggcgctggacagcctgcacggccacctgcagggcacgctgttctgcgtgttcggc
tgcggtggcgagcgcgataccggcaagcgcccgcagatggctgccattgccgagcgcctg
gccaaccaggtcatcgtcaccgacgacaacccgcgtggcgaagacggcgacgtgatcgtg
gccgacatcctggctggcttcaccgatgcctcggccgtgaccgtgcagcgcaaccgcgcg
cgtgcgatcggcctggcggtgaagcgcgctggtgccggcgacatcatcctgatcgccggc
aagggccacgagccctaccaggaagtgaatggcgtgcggcatgacttcgacgacaccgaa
gtgtcggctgccgcgctggctgcgaaggccggtgttctagcagccgagaccggggagggc
gccgcatga
DBGET
integrated database retrieval system
