Stenotrophomonas sp. MYb57: CLM74_13970
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Entry
CLM74_13970 CDS
T05384
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
stem
Stenotrophomonas sp. MYb57
Pathway
stem00020
Citrate cycle (TCA cycle)
stem00785
Lipoic acid metabolism
stem01100
Metabolic pathways
stem01110
Biosynthesis of secondary metabolites
stem01120
Microbial metabolism in diverse environments
stem01200
Carbon metabolism
stem01210
2-Oxocarboxylic acid metabolism
Module
stem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
stem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
stem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CLM74_13970
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CLM74_13970
Enzymes [BR:
stem01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CLM74_13970
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AVJ33796
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All DBs
Position
3040625..3043456
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AA seq
943 aa
AA seq
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MDNQLKQFAQSSQLAGGNASYVEDLYEQYLVSPDSVDPKWKTYFDGFKGREAGDIPHSAV
ISHIADAAKDALKAGTGTGAGDERERNVGRLITAYRSRGHLDARLDPLGLASPVNTPDLG
LPFHNLSDADLNSEFSTGGVGGQPRMKLRDLLARLKATYTGSIGAEFMHISEVEQRQWIY
KKLELAGGNYQLDADTQRRTLERLTAAEGLERYLHTKYVGQKRFSLEGGDSLIPMMDTII
RSAGKDGVKDVVIGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHDEHASAGDVKYHMGF
SADVATEGGPVHLALAFNPSHLEIADPVVAGSVRSRQERRKDTARKQVMPILIHGDAAFS
GQGVVMELFQMSQARGFAVGGTVHIVVNNQVGFTTSNPQDTRSTRYATDVAKMIAAPVLH
VNGDDPEAVVFAAQLAFEFRQKFAKDVVIDLMCYRRWGHNEADEPAITQPLMYQVIRKHA
TTREMYAEQLEKAGVIAAGAGKAMVDAYREKLDAGEVTTELAKVEKTPPTSPLFVDWPKL
LEGKLSDPVSTKVDKDKLVALAKLINTVPEEVQLHSRVSKVYDDRRKMAAGEIPGDWGFA
ENLAYATLLDEGSALRLVGQDVGRGTFTHRHAILHDQKTDNYYLPLRQLVDSPEKATVID
SLLSEEAVMAYEYGFSTTDPNTLCIWEGQFGDFANGAQVVIDQFIAAGEAKWGRISGLTL
LLPHGYEGQGPEHSSARLERFLQLCALENMLVVVPSTPAQAFHMLRRQQHLTTRKPLVVM
SPKSLLRHKLAVSTLDELANGEFQHLIGDANADAKKVKRVVLCSGKVYYDLLEDQTKRGQ
DDVAIIRVEQLYPFPRALLAAELKKYGKATDVVWTQEEPQNQGAWYQIRHHLQFCLADGQ
SLHYAGRARSASPAAGHMADHVREQQQLVADALVNPFNDSFAE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatcaactgaagcagtttgcgcaatcttcgcaactcgccggcggcaacgcctcc
tatgtcgaggacctgtacgagcagtacctggtctccccggatagtgtcgatcccaaatgg
aaaacctacttcgacggcttcaagggccgcgaagcgggcgacattccgcactcggccgtc
atttcccacatcgcggacgcggccaaggatgcgctgaaagcaggcaccggcaccggtgca
ggcgatgagcgcgagcgcaatgtcggtcgtctgatcaccgcctaccgttcgcgtggtcat
ctggacgcccgcctggacccgctgggcctggcctctccggtcaacaccccggacctcggc
ctgcccttccacaacctgtccgatgctgacctcaacagcgagttcagcaccggcggcgtg
ggtggccagccgcgcatgaagctgcgtgacctgctggcgcgcctgaaggcgacctacacc
ggttcgatcggtgcggagttcatgcacatctccgaggtcgagcagcgccagtggatctac
aagaagctggaactggccggtggcaactaccagctggacgctgacacccagcgccgcacg
ctggagcgcctgaccgccgccgaaggcctcgagcgctacctgcacaccaagtacgtcggc
cagaagcgcttctcgctggaaggcggcgactcgctgatcccgatgatggacaccatcatc
cgcagcgccggcaaggatggcgtcaaggacgtggtgatcggcatggcccaccgcggccgc
ctgaacgtgctggtcaacaccctcggcaagaacccgcgcaagctgttcgacgaattcgaa
ggcaagttcgagcacgacgagcacgcttcggccggcgatgtgaaataccacatgggcttc
tccgccgacgtggccaccgagggtggcccggtgcatctggccctggcgttcaacccgtcg
cacctggaaatcgccgacccggtggttgccggctcggtgcgttcgcgccaggaacgccgc
aaggacaccgcacgcaagcaggtgatgccgatcctgatccacggcgacgcggccttctcc
ggccagggcgtggtcatggagctgttccagatgtcgcaggcccgcggcttcgccgttggc
ggcaccgtgcacatcgtggtcaacaaccaggtcggcttcaccacctccaatccgcaggac
acgcgctccacgcgctatgccaccgacgtggcgaagatgattgccgccccggtgctgcac
gtgaacggcgatgatccggaagcggtggtgttcgccgcgcagctggcgttcgagttccgc
cagaagttcgccaaggacgtggtcatcgacctgatgtgctaccgccgttggggccacaac
gaggccgacgagccggcgatcacccagccgctgatgtaccaggtgatccgcaagcacgcc
accacccgcgagatgtacgccgagcagctggaaaaggcaggcgtgatcgccgccggcgcc
ggcaaggcgatggtcgatgcgtaccgcgagaagctcgatgccggtgaagtgaccaccgag
ctggccaaggtcgaaaagaccccgccgaccagcccgctgttcgttgattggccgaagctg
ctggaaggcaagctgtccgatccggtgtcgacgaaggtcgacaaggacaagctggtcgcg
ctggccaagctgatcaacaccgtgcccgaagaagtgcagctgcactcgcgcgtgtccaag
gtgtacgacgaccgccgcaagatggctgccggcgagatcccgggcgactggggctttgcc
gagaacctggcctacgccaccctgctggatgaaggcagtgcgctgcgcctggtcggccag
gacgtcggccgcggcacgttcactcaccgccacgcgatcctgcacgaccagaagaccgac
aactactacctgccgctgcggcagctggtggattcgccggagaaggccaccgtcatcgat
tcgctgctcagcgaagaagcagtgatggcctacgagtacggtttctcgaccaccgatccg
aacaccctgtgcatctgggaaggccagttcggcgacttcgccaacggcgcccaggtggtg
atcgatcagttcatcgccgccggcgaagcaaagtggggccgcatctctggcctgaccctg
ctgctgccgcatggctatgaaggtcagggcccggaacacagctcggcgcgcctggagcgc
ttcctgcagctgtgcgcgctggagaacatgctggtggtggtgccgtcgaccccggcgcag
gccttccacatgctgcgtcgccagcagcacctgaccacccgcaagccgctggtggtgatg
tcgcccaagtcgctgctgcgccacaagctggccgtgtcgaccctggacgagctggccaat
ggcgagttccagcacctgatcggcgatgccaatgcagatgccaagaaggtcaagcgcgtg
gtgctgtgctcgggcaaggtctactacgacctgctggaagaccagaccaagcgtggccag
gacgacgtggcgatcatccgcgtggagcagctgtacccgttcccgcgtgcgctgctggct
gccgaactgaagaagtacggcaaggccaccgacgtggtgtggacgcaggaagaaccgcag
aaccagggcgcgtggtaccagatccgccaccacctgcagttctgcctggccgatggccag
agcctgcactacgccggtcgcgcacgttcggcttcgccggctgccggtcacatggctgac
cacgtccgcgaacagcagcagctggtcgccgatgcactggtcaacccgttcaacgactcg
ttcgctgaataa
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