Stenotrophomonas sp. WZN-1: CCR98_13550
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Entry
CCR98_13550 CDS
T04963
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
sten
Stenotrophomonas sp. WZN-1
Pathway
sten01501
beta-Lactam resistance
sten01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sten00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CCR98_13550
01503 Cationic antimicrobial peptide (CAMP) resistance
CCR98_13550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sten02000
]
CCR98_13550
01504 Antimicrobial resistance genes [BR:
sten01504
]
CCR98_13550
Transporters [BR:
sten02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CCR98_13550
Antimicrobial resistance genes [BR:
sten01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CCR98_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ARZ75151
LinkDB
All DBs
Position
2858831..2862004
Genome browser
AA seq
1057 aa
AA seq
DB search
MPKFFIEHPVFAWVVAILISLSGVIAILNLGVESYPNIAPPQVTVSATYPGASADTTEKS
VTQVIEQQLTGIDHLLYFSSSSASNGRAQITLTFETGTDPDIAQVQVQNKVSLATPRLPS
EVTQQGVVVAKANAGFLMVIALQSDTPAINRDALNDIVGSRVLDQVSRIPGVGSTQQFGS
EYAMNIWLNPEKMQGYGLSASQVLAAVRAQNVQFAAGALGSDPSPEGQHFTATVSAEGRF
SSPQEFENIILRANADGSRVLLKDIARVAFGANNYGFDTQYNGKPTGAFAIQLLPGANAL
NVADAVRAKMDELQPSFPAGVTWFSPYDSTTFVKISIQEVVKTLFEAVFLVFLVMLIFLQ
NFRATLIPTLVIPVALLGTFLGMWMIGFTINQLTLFAMVLAIGIVVDDAIVVIENVERIM
TEEGLAPKPATQKAMTQITGAVVAITVVLAAVFIPSALQGGAAGEIYKQFALTIAISMAF
SAFLALGFTPALCATFLKPTHNDNPNIVYRTFNKYYDKISHTYVGHITSAVRHAPRWMIL
FVVLTALCGFLFTRMPGSFLPEEDQGYALAIVQLPPGSTKGQTNEVFAQMRGILEKQDGY
EGMLQVAGFSFVGSGENVGMGFIRLKPWEERKFTAPEFIQNMNGAFYGIKEAQIFVVNLP
TVQGLGQFGGFDMWLQDRSGAGYEQLTQARNILLGKAAQKPEALVGVRPNGLENAPQLQL
HVDRVQAQSMGMSVSDVYSTIQLMLAPVYVNDFFYEGRIKRVTMQADGPYRTGQESLKSF
YSPSSLTTNADGTNAMIPLNTVVKSEWVSAPPSLSRYNGYSAINIVGSQAPGTSSGEAMQ
TMESIVNDDLPAGFGYDWSGMSYQEILAGNAATLLLVLSIVVVFLCLAALYESWSIPVAV
LLVVPLGVLGALGLSMLRGLPNDLFFKIGLITVIGLAAKNAILIVEFAVEQRAAGKNLRD
ATIEAARLRFRPILMTSFAFIMGVIPMAISTGAGANSRHAIGTGVIGGMLFATLLGLLMI
PVFFVVVRRMLGDKLDEPSKEFMERQRDADAAHRPDR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatttttcatcgaacatccagtcttcgcctgggtggttgcgatcctgatctcg
ctcagcggcgtgatcgcgatcctcaacctgggcgtggagtcctatcccaacatcgccccg
ccgcaggtcaccgtctcggcgacctacccgggcgccagtgcggacaccaccgagaaatcg
gtcacccaggtgatcgagcagcagctgaccggtatcgatcacctgctgtacttcagttcc
tcttcggcctccaatggccgcgcgcagatcaccctgaccttcgagaccggtaccgatccg
gacatcgcccaggtgcaggtgcagaacaaggtctcgctggccacgccgcgactgccgtcg
gaagtgacccagcagggcgtggtggtggccaaggccaacgccggcttcctgatggtgatc
gcgctgcagtccgatacaccggccatcaaccgtgacgccctgaacgacatcgtcggttcg
cgcgtgctcgaccaggtctcgcgtatccccggcgtcggcagcacccagcagttcggttcc
gagtacgccatgaacatctggctgaacccggaaaagatgcagggctacggcctgtcggcc
agccaggtgctggccgcggtgcgtgcgcagaacgtgcagttcgctgccggtgcgctgggt
tcggacccgtcgccggaaggccagcacttcaccgccacggtctcggccgaaggccgcttc
agctcgccgcaggagttcgagaacatcatcctgcgcgccaacgctgacggctcgcgcgtg
ctgttgaaggacatcgcccgcgttgccttcggtgccaacaactacggcttcgacacccag
tacaacggcaagccgaccggcgccttcgccatccagctgctgccgggcgccaacgccctg
aacgtggccgatgcggtgcgcgccaagatggacgagctgcagcccagcttcccggccggc
gtgacctggttctctccgtacgacagcaccaccttcgtcaagatctccatccaggaagtg
gtcaagacactgttcgaagcagtgttcctggtgttcctggtgatgctgatcttcctgcag
aacttccgcgccaccctgatcccgaccctggtcatcccggtggccctgctcggtaccttc
ctgggcatgtggatgatcggcttcacgatcaaccagctgaccctgttcgcgatggtgctg
gcgatcggcatcgtggtcgatgacgcgatcgtggtgatcgagaacgtcgaacgcatcatg
accgaggaaggcctggcgccgaagccggccacgcagaaggcgatgacccagatcactggc
gcggtggtggcgatcaccgtcgtgctggccgcggtgttcatcccgtccgccctgcagggt
ggtgccgccggtgagatctacaagcagttcgcgctgaccatcgccatctcgatggcgttc
tcggcgttcctggcactgggcttcaccccggcgctgtgcgcgaccttcctcaagccgacg
cacaacgacaacccgaacatcgtctaccgcaccttcaacaagtactacgacaagatcagc
cacacctatgtgggccacatcacctcggcggtgcgccatgcgccgcgctggatgatcctg
ttcgtggtgctgaccgcgctgtgcggcttcctgttcacccgcatgccgggcagcttcctg
ccggaagaagaccagggctatgcgctggcgatcgtgcagctgccgccgggctcgaccaag
ggccagaccaacgaagtgttcgcgcagatgcgtggcatcctggaaaagcaggatggctat
gaaggcatgctgcaggtggctggcttcagcttcgtcggttccggcgagaacgtgggcatg
ggcttcatccgcctgaagccgtgggaggaacgcaagttcaccgcgcccgagttcatccag
aacatgaacggcgcgttctacggcatcaaggaagcgcagatcttcgtggtcaacctgccc
accgtgcagggcctcggtcagttcggcggcttcgacatgtggctgcaggaccgcagtggt
gcgggctatgaacagctgacccaggcgcgcaacatcctgctgggcaaggctgcgcagaag
cccgaagcactggtcggcgtgcgtccgaacgggctggagaacgccccgcagctgcagctg
cacgtcgaccgcgtgcaggcgcagtcgatgggcatgtcggtgtcggacgtgtacagcacc
atccagctgatgctggctccggtgtacgtcaacgacttcttctacgaaggccgcatcaag
cgcgtgaccatgcaggccgatggcccgtaccgcaccggccaggaatcgctgaagagcttc
tacagcccgtccagcctgaccaccaatgcggacggcaccaacgcgatgatcccgttgaac
acggtggtcaagtccgaatgggtttcggcaccgccgtcgctgagccgctacaacggctac
tcggcgatcaacatcgtcggctcgcaggccccgggtaccagctcgggtgaagcgatgcag
accatggagagcatcgtcaacgacgacctgccggccggcttcggctacgactggtccggc
atgtcctaccaggaaatcctggccggcaacgccgcgacgctgctgctggtgctgtccatc
gtggtggtgttcctgtgcctggcggccctgtacgaaagctggtcgatcccggtggcggtg
ctgctggtcgtgccgctgggcgtgctcggtgccctcggcctgtcgatgctgcgcggcctg
cccaacgatctgttcttcaagatcggcctgatcaccgtgatcggcctggcggcgaagaac
gcgatcctgatcgtggagttcgcagtggagcagcgcgcagccggcaagaacctgcgcgat
gccaccatcgaggcggcccgcctgcgcttccgcccgatcctgatgacgtcgtttgcgttc
atcatgggcgtgatcccgatggcgatctccaccggcgccggcgccaactcccgccatgcc
atcggcaccggcgtgatcggcggcatgctgttcgccaccctgctcggcctgctgatgatc
ccggtgttcttcgtggtcgtgcgccgcatgctgggtgacaagctggatgaaccgtcgaag
gagttcatggagcgccagcgcgacgcggatgctgcacaccgcccggatcgttga
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