KEGG   Stenotrophomonas sp. Pemsol: PEM_11050
Entry
PEM_11050         CDS       T10809                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
steo  Stenotrophomonas sp. Pemsol
Pathway
steo01501  beta-Lactam resistance
steo01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:steo00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    PEM_11050
   01503 Cationic antimicrobial peptide (CAMP) resistance
    PEM_11050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:steo03036]
    PEM_11050
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:steo02000]
    PEM_11050
   01504 Antimicrobial resistance genes [BR:steo01504]
    PEM_11050
Chromosome and associated proteins [BR:steo03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    PEM_11050
Transporters [BR:steo02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   PEM_11050
Antimicrobial resistance genes [BR:steo01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    PEM_11050
SSDB
Motif
Pfam: BSH_RND Beta-barrel_RND RND-MFP_C HH_MFP_RND YknX_C BSH_CusB HH_EMRA Beta-barrel_RND_2 HH_YBHG BSH_CzcB
Other DBs
NCBI-ProteinID: AYA91250
LinkDB
Position
2361754..2363022
AA seq 422 aa
MTAPLRTLALTCAVAVALAACKKPEQQTPPPPEVGVIDAKPQTLPLQRELVGRLSPFRSA
DVRARVPGVLLKRVYQEGSQVKQGQTLFLIDPAPLRASLNASEAQLASARATYANAKVAA
DRARSLAPQQFVSKSDLDNAESAERTALAAVKQAEAAVTSSRINLGYAEVTAPISGVANK
QQVTEGALVGQGDVTLLTTVDQLDPLYVNFSLSVDELTQLRAQQAKGALALSGDGKATVN
VKLADGTTYGEPGTLDFSSTTVDPATGAVSLRALLPNPQQILLPGAFVSFQANLGERNNA
FLVPQQALLRDTTGGYVMVVGADGKVVRKNVKTDGAQNGNWLVSDGLAAGDKVIVAGVQK
VKEGAPAVAKPWTPGQDANGKPAAGGAAPAGAAPAAGKAPADAAKPEQADAAKPAATDSN
KQ
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaccgccccactccgcacccttgccttgacgtgcgccgttgctgtcgcgctggctgcc
tgcaagaagccggaacagcagacgcccccgccgccggaggtgggcgtgatcgacgccaag
ccgcagaccctgccgctgcagcgcgaactggtcggccgcctgtcgccgttccgcagcgcc
gacgtccgcgcacgcgtgcccggcgtgctgctcaagcgcgtctaccaggaaggctcgcag
gtcaagcagggccagaccctgttcctgatcgacccggcgccgctgcgagcctcgctcaac
gcctccgaggcccagctggcctcggcccgcgcgacctacgccaacgccaaggtcgccgcc
gaccgcgcacgctcgctggccccgcagcagttcgtctccaagtccgacctggacaacgcc
gaatcggccgagcgcaccgcgctggccgcggtcaaacaggccgaagcggcagtgacctcc
tcgcggatcaacctgggctatgccgaagtgaccgcgccgatcagtggcgtggccaacaag
cagcaggtcaccgagggcgcgctggtgggccagggcgatgtgaccctgctgaccaccgtc
gaccagctcgacccgctgtacgtcaacttctcgttgagcgtggacgagctgacccagctg
cgcgcgcagcaggccaagggcgcgctggcgctgtccggcgacggcaaggccacggtcaac
gtcaagctcgccgacggcaccacctatggtgagccgggcacgctggacttctcctcgacc
acggtcgacccggccaccggcgccgtgtcgttgcgcgcgctgctgccgaacccgcagcag
atcctgctgccgggcgccttcgtcagcttccaggccaacctgggcgagcgcaacaacgcc
ttcctggtgccgcagcaggccctgctgcgcgataccaccggcggctacgtgatggtggtc
ggcgccgacggcaaggtcgtgcgcaagaacgtgaagaccgatggcgcgcagaacggcaac
tggctggtcagcgacggcctggccgccggtgacaaggtgatcgtggccggcgtgcagaag
gtcaaggaaggtgcaccggcggtggccaagccgtggacccctggccaggacgccaacggc
aagccggccgcaggcggcgccgccccggcgggcgctgcaccggctgcaggcaaggcaccg
gccgacgcggccaagcccgagcaggccgatgcggccaagccggccgccaccgattcgaac
aagcagtaa

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