Stenotrophomonas sp. Pemsol: PEM_13175
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Entry
PEM_13175 CDS
T10809
Name
(GenBank) radical SAM protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
steo Stenotrophomonas sp. Pemsol
Pathway
steo00790
Folate biosynthesis
steo01100
Metabolic pathways
Module
steo_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
PEM_13175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
steo03016
]
PEM_13175
Enzymes [BR:
steo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
PEM_13175
Transfer RNA biogenesis [BR:
steo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PEM_13175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
zf-CHCC
Motif
Other DBs
NCBI-ProteinID:
AYA91652
LinkDB
All DBs
Position
complement(2844831..2845532)
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AA seq
233 aa
AA seq
DB search
MTAVTPSNAVATPSDIVQSPLPRLKITEIFTSLQGEADTAGWPTVFVRLTGCPLRCQYCD
TAYAFHGGTWWDIDDIVAEVLAQGVRHVCVTGGEPLAQKRCLVLLQKLCDAGMDVSLETS
GALDVSAVDPRVSRVVDIKTPGSAEVARNRWENLPLLTARDQIKFVICSREDYDWAKAMV
AEHGLVKRCTVFFSPSKGEITARQLADWIVEDRLPVRFQMQLHKILWNDEPGR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgttaccccgtccaacgccgtcgccacccccagcgacatcgtgcagtcgccg
ctgccgcgcctgaagatcaccgagatcttcacctcgctgcagggcgaagccgataccgct
ggctggccaaccgtgttcgtgcgcctgaccggctgcccgctgcgctgccagtactgcgac
accgcctatgccttccacggcggcacctggtgggacatcgacgacatcgtggccgaggtg
ctggcccagggcgtccgccacgtctgcgtgaccggcggcgagccgctggcgcagaaacgc
tgcctggtgctgctgcagaagctgtgcgacgcgggcatggatgtctcgctggaaacctcc
ggcgcgctggatgtcagcgcagtggacccgcgcgtgtcgcgcgtggtcgacatcaagacg
ccgggttcggccgaagtggcgcgcaaccgctgggaaaacctgccgctgctgaccgcgcgc
gaccagatcaagttcgtcatctgcagccgcgaggactacgactgggccaaggccatggtc
gccgagcacggcctggtgaagcgttgcaccgtgttcttctcgccgagcaagggcgagatc
accgcgcggcaattggccgactggatcgtcgaagaccggctgccggtgcgcttccagatg
cagttgcataaaatcctgtggaacgacgagcccggccgatga
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