Stenotrophomonas sp. Pemsol: PEM_16065
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Entry
PEM_16065 CDS
T10809
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
steo Stenotrophomonas sp. Pemsol
Brite
KEGG Orthology (KO) [BR:
steo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
steo03000
]
PEM_16065 (dksA)
03021 Transcription machinery [BR:
steo03021
]
PEM_16065 (dksA)
03009 Ribosome biogenesis [BR:
steo03009
]
PEM_16065 (dksA)
Transcription factors [BR:
steo03000
]
Prokaryotic type
Other transcription factors
Others
PEM_16065 (dksA)
Transcription machinery [BR:
steo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
PEM_16065 (dksA)
Ribosome biogenesis [BR:
steo03009
]
Prokaryotic type
rRNA transcription factors
PEM_16065 (dksA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
AYA92190
LinkDB
All DBs
Position
complement(3501723..3502949)
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AA seq
408 aa
AA seq
DB search
MAAKKTAKKAATAAKKTAKPVVKKLAAKPVAKKPASKPATKAASSQPAARKATAKKTPVK
ATKPVAKKAAAPAKAKPAAASKKAPVKKTVSKAAPVKKAAAKPVARKAAAKPAPKAVVKK
AAAKPVAKPVAKKVAAAKPAATPAAVKKVAKNVAAPATKPTPAPVVKSAPKPAAKPAPAK
PVPAKTVAVAAAQPASTPAPAAAPVASKAPQSKNPVPVSKSPAKTAVKSDSAPKTVSRPV
GKVAVAVAARSAAPAPRSKYKVVEYKTDEATGRPILPAGYKPSSEEEYMSSLQQEYFRQR
LQNWRADLVEESKQTIENLREEVRDIGDEAERATRETENSLELRTRDRYRKLIGKIDSTL
KRLEAGDYGYCVDTGEEIGLERLEARLTAERTIDAQERWEHLQKQQGD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctaaaaaaactgcaaagaaggccgcaacggccgccaagaaaaccgccaagcct
gttgtgaagaagttggcggcaaagcccgttgccaagaagccggccagcaagccggcgacc
aaggcagcgtcctcgcaaccggcggccaggaaggccaccgcaaagaaaacgccggtcaag
gcaaccaagccggtggcgaagaaggccgctgcgcccgccaaggccaagccagccgctgcc
agcaagaaggcgccggtgaagaagaccgtcagcaaggctgcgccggtgaagaaggccgcc
gccaagccggtggccaggaaggcagccgccaagccagcgccgaaggcggtggtgaagaag
gctgcagccaagccggtcgccaagcccgtagcaaagaaggtcgctgcggctaaaccggcc
gccacgcccgccgctgtaaagaaggttgccaagaacgttgccgcgccggccacaaagccg
accccggccccagtagtgaagtccgcaccgaagcctgctgccaagccggctccggccaag
cctgtcccggccaagaccgtggcagtggcggcagcccagccggcctcaacgccggccccg
gccgccgctcctgtcgcttcgaaggccccgcaatccaagaatcccgtgcccgtttcgaaa
tcgcctgccaaaaccgccgtgaaatccgattccgccccgaagaccgtgtcgcgccctgtc
ggcaaggttgccgtggccgtcgccgcccgctcggcagcaccggccccgcgcagcaagtac
aaggtggtcgagtacaagaccgacgaggccactggccgcccgatcctgccggctggctac
aagccgtcctcggaagaggaatacatgagctcgctgcagcaggagtatttccgccagcgc
ctgcagaactggcgcgcggacctggtggaagagtccaagcagaccatcgagaacctgcgc
gaggaagtgcgtgacatcggcgacgaagccgagcgtgcgacccgcgagaccgagaactcg
ctggaactgcgtacccgcgaccgctaccgcaagctgatcggcaagatcgacagcaccctg
aagcgcctggaagccggcgactacgggtactgcgtcgacaccggcgaagaaatcggcctg
gagcgcctggaagcgcgcctgaccgccgagcgcaccatcgacgcccaagagcgttgggag
cacctgcagaagcagcagggcgactga
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