Stenotrophomonas sp. ASS1: MG068_03025
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Entry
MG068_03025 CDS
T06051
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
stes
Stenotrophomonas sp. ASS1
Pathway
stes00300
Lysine biosynthesis
stes00550
Peptidoglycan biosynthesis
stes01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stes00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MG068_03025
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MG068_03025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stes01011
]
MG068_03025
Enzymes [BR:
stes01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
MG068_03025
Peptidoglycan biosynthesis and degradation proteins [BR:
stes01011
]
Precursor biosynthesis
Amino acid ligase
MG068_03025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
QBL39548
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Position
665301..666809
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AA seq
502 aa
AA seq
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MSPSMLLSQLLPDVALAGHDPVLTGLVLDSRAVRPGNAFVAIAGFGAHGLGFVEQARAAG
AGAILFEPPAPVELPAPDDAIAVPGLRARMGAMADQFHGAPSRAMAMVGVTGTNGKTSTV
QLLAQAWHLLGTPSGSIGTLGAGLYGSVEPTGFTTPLVLQMHALLAQLRDAGARAVAMEV
SSHALDQGRVDAVHYDVAVFTNLTRDHLDYHGDMASYGAAKARLFHRPGLKAAVINLDDA
FGRQLFAGLPAGVQPIGLSSRGATDASVRAEALQLDGRGIAFELVIDGQRAAVQSPLLGR
FNVDNLLAVAGTLHAQGQPLPRIAEVLSALQPIRGRMNRLGGEDGLPTVVVDYAHTPDAL
EQALDSLHGHLQGTLFCVFGCGGERDTGKRPQMAAIAERLANQVIVTDDNPRGEDGDVIV
ADILAGFTDASAVTVQRSRARAIGLAVKRAGAGDIILIAGKGHEPYQEVNGVRHDFDDTE
VAAAALAAKAGVLSAQAGEGIA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagtccttcgatgttgctttcgcagttgcttccggatgtggccctggcgggccacgat
cccgttttgaccggcctggtgctggacagccgcgccgtgcgccccggcaatgccttcgtc
gccatcgccggtttcggcgcgcatggcctgggctttgtcgagcaggcccgtgcggccggc
gctggcgccatcctgttcgaaccgccggcaccggtcgaactgccggcaccggacgatgcg
atcgctgtgccgggcctgcgcgcgcgcatgggtgcgatggccgaccagttccatggcgca
ccgtcgcgggcgatggcgatggtgggcgtgaccggcaccaacggcaagacctccaccgtg
cagctgctggcccaggcctggcacctgctcggaacgcccagtggcagtatcggcacgttg
ggcgccggactttatggttcggttgagccgaccggtttcactacgccgctggtgctgcag
atgcatgcgctgctggcgcagctgcgtgatgccggtgcgcgcgcggtagcgatggaagtc
agctcgcacgcgctggaccagggccgcgtggatgcggtgcactacgacgtggcggtgttt
accaatctcacccgcgaccatctggactaccacggcgacatggccagctacggcgcggcc
aaggcacggctgttccatcgcccgggactgaaggccgcggtgatcaatcttgacgacgcg
ttcggtcgccagctgttcgccggcctcccggcgggcgtgcaaccgatcggcctgagctcg
cgcggtgccaccgatgccagcgtgcgcgccgaggcgctgcagctggacggccgtggcatt
gccttcgaactggtcatcgacggccagcgcgcggcggtgcagtcgccgctgctgggccgc
ttcaacgtggacaacctgctggccgtggccggcaccctgcacgcgcagggtcagccgctg
ccgcgcattgccgaggtgttgtcggcgctgcagccgatccgtggccgcatgaaccgcctg
ggcggcgaagacggcctgccgaccgtggtggtcgattacgcgcataccccggacgcactg
gaacaggcgctggacagcctgcacggccacctgcagggcacgctgttctgcgtgttcggc
tgcggtggcgagcgtgataccggcaagcgcccgcagatggccgcgatcgccgagcgcttg
gccaaccaggtcatcgtcaccgacgacaatccgcgtggcgaagatggcgacgtgatcgtg
gccgacatcctggccggcttcaccgatgcctccgccgtgaccgtgcagcgcagccgcgcg
cgtgcgatcggcctggcggtgaagcgtgccggtgccggcgacatcatcctgatcgctggc
aagggccacgagccgtaccaggaagtgaatggcgtgcgccatgacttcgacgacaccgaa
gtggccgccgctgcgttggccgccaaggccggtgtgctcagcgcgcaggccggggagggc
atcgcatga
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