Sphingobacterium thalpophilum: NCTC11429_00980
Help
Entry
NCTC11429_00980 CDS
T06778
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11429_00980 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_00980 (nth)
Enzymes [BR:
stha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11429_00980 (nth)
DNA repair and recombination proteins [BR:
stha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11429_00980 (nth)
Prokaryotic type
NCTC11429_00980 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF2400
DUF763
HHH_5
HHH_8
POLQ_helical
ZW10_C
Motif
Other DBs
NCBI-ProteinID:
VTR32228
UniProt:
A0A4V6Z2H9
LinkDB
All DBs
Position
1:1079949..1080626
Genome browser
AA seq
225 aa
AA seq
DB search
MLKQERYKAFVDYFSKNNPDAQTELNYSNPYELLVAVILSAQCTDKRINQVTPKLFERYP
DAQALAASSVDEVFSYIRSVSYPNNKAKHLVGMAQMLIEKFNNVVPEKIEDLIKLPGVGR
KTANVISSVVYHNPAMAVDTHVFRVANRLGLTYRATTPLAAEKQLVKNLPKDTIAIAHHW
LILHGRYICLARRPLCEKCPITYMCKYFEKTYHIKDTSAAAESKN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaggaacgatacaaagcttttgtggattatttctcaaaaaacaatccggac
gcacagactgagctcaactatagtaatccatatgaattgcttgtggcggtcattttatct
gctcaatgtacagacaagaggataaatcaggttacgcctaagcttttcgaacgttatccg
gacgctcaggcattggcagcctcaagtgtagatgaagtattcagttatatccggtcagtc
agctatcctaacaataaagcaaaacatcttgtcggcatggcgcagatgctgattgaaaaa
tttaacaatgtggttcccgaaaaaattgaggaccttattaagttaccgggtgtgggcaga
aaaacagccaatgtcatttcgtctgtggtgtatcacaatcctgccatggctgtggacacc
cacgtcttccgtgttgccaaccggcttgggctgacctaccgtgcaaccacgccattggcc
gccgaaaagcagctggtcaaaaaccttccaaaggatacgatcgccattgcacaccattgg
cttattctgcatggccgctatatctgcctggcccgaagaccactatgcgaaaaatgtcct
attacatatatgtgcaagtattttgagaaaacatatcatataaaagacacttcagccgcc
gctgaatcgaaaaactaa
DBGET
integrated database retrieval system
