Sphingobacterium thalpophilum: NCTC11429_04766
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Entry
NCTC11429_04766 CDS
T06778
Symbol
bepF_5
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha01501
beta-Lactam resistance
stha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC11429_04766 (bepF_5)
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC11429_04766 (bepF_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stha03036
]
NCTC11429_04766 (bepF_5)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_04766 (bepF_5)
01504 Antimicrobial resistance genes [BR:
stha01504
]
NCTC11429_04766 (bepF_5)
Chromosome and associated proteins [BR:
stha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NCTC11429_04766 (bepF_5)
Transporters [BR:
stha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NCTC11429_04766 (bepF_5)
Antimicrobial resistance genes [BR:
stha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NCTC11429_04766 (bepF_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
YknX_C
Beta-barrel_RND_2
BSH_CzcB
CzcB_C
Biotin_lipoyl
RND-MFP_C
BSH_CusB
HH_MFP_RND
BSH_LcnD
BSH_YknX
HH_EMRA
HH_AAEA_pHBA
SHOCT
BSH_YhbJ
PTS_EIIA_1
Acetyltransf_18
LcnD_C
BSH_RND_rel
Beta-barrel_RND
ATP-synt_DE
Motif
Other DBs
NCBI-ProteinID:
VTR53201
UniProt:
A0A4U9W3D9
LinkDB
All DBs
Position
1:5392826..5393887
Genome browser
AA seq
353 aa
AA seq
DB search
MNKKTSIYILLACAAIGGGYFILHSKKDKKDSVKPSAKKDMPIPAQAIIAKSSVADRSIN
LSGSLDAEEKVEVRSEVSGRITKIYFSEGQRVQQGQPLIKIDDIELQAQLKQAQTTNQLN
AENERRAKLLLQKGAISQEEFDMASAALKTSLAQIQLIQAQISKTAVRAPFSGVIGLRNI
SVGAIVSPSTLIANLVKDNSVKITFAIPEKYSNVIKLNSAIEFTVANDPTVMKANVYAIE
PEVSLDTRTLSVRARASNDQGRLRAGSFVNVIVPIETENDAIAIPTEAIVPIQDGKKVFI
VQNGLAKEAKVETGARTDKEIVILSGISAGDTVLTTGVLALKDGAKVKVSLVN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaaacaagcatttatatacttttagcttgcgccgccattgggggaggatat
tttattctacactccaaaaaagataaaaaagatagtgtcaaaccatcggcgaaaaaggat
atgcccatacctgcacaggctatcatagccaagtcttcagtagcggaccgttccatcaat
ttgtctggcagtctggatgctgaagaaaaagtggaagtcagaagtgaggtaagtggccga
attacaaaaatctacttttcagaaggccaacgggtccagcaggggcaaccgttgatcaaa
atcgacgatatcgagctgcaggcgcagctcaaacaagcgcagacgactaatcagctgaat
gccgaaaacgagcgtcgtgcaaagcttctgcttcaaaaaggcgccataagtcaggaagaa
tttgatatggccagtgctgctctaaagacatcactggcacagatacaactgatccaggca
caaatatcaaaaactgctgttcgcgctcccttcagtggtgtgattggtctgcgaaatatc
tctgtcggtgctatcgtctccccaagcacccttatcgctaatctggtaaaagacaattca
gtcaagatcacctttgccatcccagagaaatatagcaatgtaatcaagttgaattcggca
attgaatttaccgttgccaatgacccaacagtaatgaaagcaaatgtttatgccatagaa
cctgaagtgtcacttgacacaagaacactcagcgttcgcgcaagggcatctaacgatcag
ggaagactgagagccggctcatttgtcaatgtaatcgtccccatagaaacagaaaatgac
gcgattgccataccaacagaagcgatcgtgcctatacaggacggcaaaaaggtgtttata
gtccaaaatggtctggcaaaagaggcgaaagtagaaaccggcgcccgtacagataaagaa
attgtcattctgtcgggcataagtgctggagatacggtactgaccacgggagtcctggcg
ctgaaagatggtgcaaaggttaaggtatcactagttaactaa
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