Sphingobacterium thalpophilum: NCTC11429_04896
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Entry
NCTC11429_04896 CDS
T06778
Symbol
bepF_6
Name
(GenBank) Efflux pump periplasmic linker BepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha01501
beta-Lactam resistance
stha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC11429_04896 (bepF_6)
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC11429_04896 (bepF_6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stha03036
]
NCTC11429_04896 (bepF_6)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_04896 (bepF_6)
01504 Antimicrobial resistance genes [BR:
stha01504
]
NCTC11429_04896 (bepF_6)
Chromosome and associated proteins [BR:
stha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NCTC11429_04896 (bepF_6)
Transporters [BR:
stha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NCTC11429_04896 (bepF_6)
Antimicrobial resistance genes [BR:
stha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NCTC11429_04896 (bepF_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
CusB_dom_1
DUF2963
Motif
Other DBs
NCBI-ProteinID:
VTR53731
UniProt:
A0A4U9W4Q9
LinkDB
All DBs
Position
1:5537859..5539055
Genome browser
AA seq
398 aa
AA seq
DB search
MKTNVSPSLKKIYIPALNSVKRINIVKTAYVLSAIFLYSCSTGTSKPMDAPPVSLPVIAI
EQGNETVYQEYPATIEASSNIEIRPQVEGILEQIYVDEGARVSKGQALFKINDRPYQEQL
NQAKANLLAAKATLENAELEVEKKTKLVNNKVLTDFQLKSAISARNAAKANVQLAVSAVE
AAKINVGYTLIRASADGYIGRLQRKQGSLVGPTDGQPLTTLSNVKDLHVYFSLGENDFIA
FKNNTAGDNLQQKLNNLPPISLVLSDQTVYDQKGKIDMVDGQFDKNTGAITLRATFSNPE
GVLRNGNTGRVRLQKKYDQALLVPQLATLEMQDKIFVYTVGKENKVVQQPITVIGKSGAN
YLVSKGISAGDRIVYKGIDLLQDGQKITPQAFSKDSIN
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaatgtatcaccaagtcttaaaaagatttacattccagcacttaacagtgtt
aaacgaattaatatcgtaaagactgcatatgtgctgagcgctattttcttatacagctgt
tcgacaggcacaagcaaaccaatggatgctcctcctgtcagccttccagttatcgctatc
gaacaaggcaacgagacggtataccaagaatatcccgctaccatagaagcttcatcgaat
attgaaatcagaccccaggtagaaggaatcctcgaacagatctatgtcgatgagggcgct
agagtaagcaaaggtcaggcacttttcaagattaacgaccgcccatatcaagagcagcta
aaccaagccaaggcaaacttgctggctgcaaaagcgaccttggaaaatgcggagctggaa
gttgaaaagaaaactaaattggtcaacaacaaagtactgactgattttcagctgaaatct
gccattagtgcccgcaatgcagcaaaagccaatgtacagctggcggtgtctgcggtagaa
gcggcaaaaatcaacgtgggttataccttaattcgcgcatcggccgatggttatatcgga
agactgcagcgtaagcagggaagcttggtaggacctacggacggtcagccgctgacaacg
ctttccaatgttaaagatctccatgtttatttttctttgggcgagaatgatttcattgca
ttcaaaaacaatacagcaggcgataatcttcaacagaaattaaacaaccttccccccatc
agcctggtactttctgatcagaccgtttatgaccaaaaaggaaaaatagatatggtggat
ggccagtttgataaaaatacaggcgccattacactcagggctaccttcagcaatccagag
ggtgtcctgcgcaatggaaacaccggccgtgttagacttcagaagaaatacgatcaagca
ctattggttcctcagctagcaacgctggaaatgcaagacaaaatcttcgtttacaccgtc
gggaaagagaacaaagtggtgcaacaaccgattactgtcatcggaaaaagtggtgccaac
tatcttgtcagcaaagggatctctgccggggatcgtatcgtctataaaggcatcgaccta
cttcaagatggccagaaaatcactccacaagctttttcaaaagacagcatcaattaa
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integrated database retrieval system
