Streptococcus thermophilus ASCC 1275: T303_08600
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Entry
T303_08600 CDS
T03360
Name
(GenBank) DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sthe
Streptococcus thermophilus ASCC 1275
Pathway
sthe03030
DNA replication
sthe03410
Base excision repair
sthe03420
Nucleotide excision repair
sthe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T303_08600
03410 Base excision repair
T303_08600
03420 Nucleotide excision repair
T303_08600
03430 Mismatch repair
T303_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sthe03032
]
T303_08600
03400 DNA repair and recombination proteins [BR:
sthe03400
]
T303_08600
Enzymes [BR:
sthe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
T303_08600
DNA replication proteins [BR:
sthe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
T303_08600
DNA repair and recombination proteins [BR:
sthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
T303_08600
NER (nucleotide excision repair)
GGR (global genome repair) factors
T303_08600
MMR (mismatch excision repair)
DNA ligase
T303_08600
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
T303_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
E1-E2_ATPase
HNOB
Motif
Other DBs
NCBI-ProteinID:
AIC24870
LinkDB
All DBs
Position
complement(1597994..1599952)
Genome browser
AA seq
652 aa
AA seq
DB search
MEKRMKELVDKLNQYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELVQADSPTHRVG
GLVLDGFEKYQHEYPLYSLQDAFSREELDAFDKRIKSEFPNADYMAELKIDGLSISLTYV
DGILQVGATRGDGSVGENITENVKRISDIPLKLDQPLNITVRGECYLPRAEFERINTQRQ
ENGEAEFANPRNAAAGTLRQLDTKVVAERRLATFFYQEAGPTERLTQNDVLNEVAELGFS
VNPRRIVTSSMDEIWDFIQAVGQDRDHLAYDIDGVVIKVNSLAMQEELGFTVKAPRWAIA
YKFPAEEKEAKLLSVDWQVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYITEKDIRIG
DTVIVYKAGDIIPAVLRVVESKRTTQEAMPVPSQCPSCGSGLLHFEDEVALRCINPSCPA
QIKEGLIHFASRDAMNISGMGPSVVEKLFKAELVKEVADIYGLNSQDFLQLEGFKEKSAE
KLYAAIQASKENSAEKLLYGLGIRHVGAKVSKQLLESFGTIKELASADVQAIAAVDGLGE
VIAKSIQRYFAKEEAQVLLKELESYGVNLSYLGQKVADDAILSGKTVVLTGKLEHLKRSE
AKAKLEALGAKVTGSVSKKTDLVVAGSDAGSKLEKAQSLGIEVKDEAWLLDL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgaatgaaagagctggttgacaaacttaaccagtatgcaaaagagtattat
accgaggataatccatcggtgtcagatgccgagtatgataagctctatcgtgagttagta
actttagaggctgaacacccagaacttgttcaggcggatagccctacgcaccgtgtgggt
ggcctggttcttgatggttttgagaaataccaacatgagtatccgctttatagtttgcag
gatgctttttcacgagaagagctagatgccttcgataagaggatcaagtccgaatttcct
aacgctgactatatggccgagctcaaaattgatggcctttcaatttctctaacctatgtg
gatggtattcttcaagtaggtgcaacgcgaggtgatggttctgttggtgaaaatatcact
gaaaatgttaagcgaatctcggatattcctctgaagttggatcaaccgcttaatatcacc
gttcggggtgagtgttatttgccacgagctgagtttgaacgcatcaacacccagcgccag
gagaatggtgaggccgaatttgccaatccacgtaatgctgcagcaggaactcttcgtcaa
ttagatacgaaagtagttgctgagcgtcgtttggccaccttcttttatcaagaagctggt
cccactgagcgcttgacacaaaatgatgtcttgaatgaagtggcagaacttggcttctcc
gttaatccacgccgtattgtgacatcatcgatggatgagatttgggactttattcaagct
gttgggcaagatcgtgatcacttggcttatgatattgatggagttgttatcaaggtcaat
agtttggccatgcaggaagaacttggctttaccgttaaggcaccacgttgggccattgcc
tataaattcccagctgaggaaaaggaagcaaaacttctctcggttgattggcaggtgggt
cgtacaggtgtagtaacgccgacggctaatttgaccccagtacaattggccgggacaaca
gttagccgagctaccctacacaatgtagattatattacggagaaagacattcgtattggt
gataccgttattgtttataaggctggtgatattatccctgctgttcttcgtgtggtagaa
agtaagcgtacaacacaagaagcgatgccagttccgagtcaatgtccatcttgtggtagt
ggtctcttacattttgaagatgaagtagccctacgttgtatcaatccatcttgtcctgct
cagattaaggaaggtcttattcattttgcttctcgtgatgccatgaacatctcaggtatg
ggaccttcagtggttgaaaaactctttaaagctgaattggttaaagaggtggctgatatc
tatggtttaaatagtcaggatttcctccaattagaaggtttcaaggaaaaatcagctgaa
aaactatatgcagctattcaagcatcaaaagaaaattctgcagagaaactgctctatggt
ttgggaattcgccatgttggtgccaaagttagtaagcaattgctagaatcttttggaact
atcaaggagttggcaagtgcagatgtccaagctattgctgctgtagatggtttgggagag
gttatcgccaagtcaatccagcgttattttgccaaggaggaggctcaagttcttctgaaa
gaactggaatcctatggtgttaatttatcctatcttggtcaaaaagtagcagatgatgcc
attctatctggtaagactgttgttttgacagggaaattggagcatcttaaacgtagtgaa
gcgaaggcaaaactagaggccctgggtgctaaggtgacgggttcagtctctaagaaaaca
gatttagtggttgctggtagtgatgccggaagtaagttggaaaaagcacaaagcctagga
attgaagtaaaagatgaggcttggttgctggatttatag
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