Caldimonas thermodepolymerans: IS481_07015
Help
Entry
IS481_07015 CDS
T06911
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm01501
beta-Lactam resistance
sthm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS481_07015
01503 Cationic antimicrobial peptide (CAMP) resistance
IS481_07015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sthm03036
]
IS481_07015
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_07015
01504 Antimicrobial resistance genes [BR:
sthm01504
]
IS481_07015
Chromosome and associated proteins [BR:
sthm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IS481_07015
Transporters [BR:
sthm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IS481_07015
Antimicrobial resistance genes [BR:
sthm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS481_07015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
CzcB_C
BSH_CusB
Beta-barrel_RND_2
RND-MFP_C
Biotin_lipoyl
HH_MFP_RND
BSH_Fcp1
BSH_YknX
RnfC_N
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QPC32889
LinkDB
All DBs
Position
1463797..1464909
Genome browser
AA seq
370 aa
AA seq
DB search
MKRRALLLVAGLVVAAVAGLGWWAAGREAAPATTSEAPAPALAVRPVWPARESWPQALPA
AGSIAAWEEVVIAPEIGGLRLAQLHVSVGDRVRKGQLLARLSPGTLEADVAASRAALHEA
EAAAAEARRAAGRALSLQGTEVLSAQAIDQAVAAAQAAEARLAAARARAQGDALRLAYTR
VQAPDDGVISARPAVEGALVQAGEELMRLQRHGRLEWRAELPGPDLAQVEPGQAARVLVG
AQAVSGRVRQVAPQVDLQRRTGIVHVELDPAPGLRAGLFARGEILGAPRPVLTLPDTALL
LRDGQAYVFRIEGDTVRQQKVTPGARRGDRVEIRAGLAPDAAVVESGVGFLADGMTVRVV
DAPPSSKERP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgagccctcctgctcgtcgcgggcctggtcgtggcggccgtcgccggcctg
gggtggtgggcggccggtcgcgaggcggctcctgcgaccacgtccgaggccccggcgccg
gccctggcggtgcggcccgtgtggcccgcgcgcgagtcctggccccaggccctgccggcg
gcgggcagcatcgccgcctgggaagaagtcgtcattgccccggagatcggtggcctgcgc
ctggcgcagctgcacgtgtcggtcggcgaccgggtccgcaagggtcagctgctcgctcgg
ctgagccccggcacgctggaggccgacgtggctgccagccgggcggcgctgcatgaagcc
gaggcggccgcggccgaggcccgccgtgccgccgggcgcgcgctgtcgctgcagggcacc
gaggtgctgtccgcgcaggctatcgaccaggcggtggcggcggcccaggcggccgaagcg
cgcctggcggctgcccgggcccgcgcgcagggcgacgcgctgcgcctggcctacacccgg
gtgcaggcgccggacgacggcgtgatcagtgcccgcccggcggtcgagggggcgctggtg
caggccggcgaggaactgatgcgcctgcagcgccacggccgcctcgaatggcgtgccgag
ctgcccggcccggacctggcgcaggtggagcccggccaggcggcccgggtcctggtgggc
gcgcaggccgtgtccggccgcgtgcgccaggtggcgccgcaggtcgacctgcaacgccgt
accggcatcgtccacgtcgagctcgatccggcccccgggctgcgcgccggcctgttcgcg
cgcggcgagatcctgggcgcgccgcgcccggtgctgacgctgcccgacactgcgctgctg
ctgcgcgacgggcaggcctacgtgttccgcatcgagggcgacaccgtgcggcagcagaag
gtgacgccgggcgcacgacgcggggaccgtgtcgagattcgcgccgggctggcgccggat
gcggcggtggtcgagtccggggtcggcttcctggccgacggcatgacggtgcgcgtggtc
gatgcaccaccctcgtcgaaggagcggccatga
DBGET
integrated database retrieval system
