Caldimonas thermodepolymerans: IS481_07020
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Entry
IS481_07020 CDS
T06911
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm01501
beta-Lactam resistance
sthm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS481_07020
01503 Cationic antimicrobial peptide (CAMP) resistance
IS481_07020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_07020
01504 Antimicrobial resistance genes [BR:
sthm01504
]
IS481_07020
Transporters [BR:
sthm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
IS481_07020
Antimicrobial resistance genes [BR:
sthm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IS481_07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Patched
SecD_SecF_C
DUF6295
FhaA_N
Motif
Other DBs
NCBI-ProteinID:
QPC32890
LinkDB
All DBs
Position
1464906..1467959
Genome browser
AA seq
1017 aa
AA seq
DB search
MNVSAWSIRHPVPALLLFATLTVVGLWAFLQARVQNFPDVDLPLVTVEARLPGTAPAQME
TEVARKLENAMATLQGLRHLHTVVQDGVATVSAEFHLEKSPQEALDDVRAAVARVRSDLP
AALRDPVVRRIEFKNDPILAYTVASSRLDEEALSWFVDDRITRRLLAVPGVGAVTRVGGL
DRQVRVELDPDRLLAWGLSAAEVSRRVVQAQREAPAGRVLLGSGEQAVRTVVAAPSAEAL
AALEIPLPGGPVLRLDQLATVHDGHAERRSAALLDGRPVVGFEIRRSTGASDLDVAAGVR
QALAELQALHPELEISEAWNAIDPVVENFEGSLSLLLEGALLAVLVVGIFLRDARATFIS
AVALPLSILPTFLVMEWMGFTLNLVTLLSLSLVVGILVDDAIVEVENIMRHLAQGKSPLE
AAREAADEIGMAVIATTFTLIAVFLPTAFMKGLAGRYFVQFGWTASIAVFFSLVVARLLT
PMMAAYLLRRPARPQAEPFWMPAYLKAARWAFTHKGATLAATAAFGVACALPLLAGAIRG
DFMPPEDGHQIRIGVELPPGATLAQTQAVAEAVRAAVATHPHVRQVHAAIGGGSRDDPLG
GAAESRTATLTLSLVPRRERRGTSQQQIEQALRARLQDVPGARITLAASEAYTFALSGED
AELLAQHAARIEQELRRLPGIGQVASSASLQRPELVVRADAARAADRGVSVEAIAETVRV
ATLGDHEQFLPQLSLSQRQVPIVVRLPEAAARDPDLLGQLPVPGERGPVPLREVATLEVA
SGPARIQRLDRLRTVSFSVELDGRPMGEVQQRVAALPGLQQLPPGLSKLDVGEAETSNEL
GRSFLLAMGTGVACIYMVLVLLFGAWAQPLTILGALLLSVPGALLALYLTGTHLSMPAMI
GMIMLMGIATKNSILLVEYAIVAQRDRGLPRLDALLDACRKRARPIVMTTLAMGAGMLPI
ALGFGADPSFRAPMAIVVIGGLLTSTVLSLLVIPVLYEVVDDAVARCRRGRRQEAAA
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcggcctggtcgatccgccatccggtgccggccctgttgctgtttgccacg
ctgaccgtcgtcggcctgtgggccttcctgcaggcccgggtgcagaactttccggacgtg
gacctgccgctcgtcaccgtcgaggcccgactgcccggtaccgcgccggcgcagatggaa
accgaggtggcccgcaagctcgagaacgcgatggccacgctgcaagggctgcggcacctg
cacacggtggtgcaggacggcgtggccacggtctcggccgagttccacctcgagaagtcg
ccgcaggaggcactggacgacgtgcgcgccgcagtcgcccgggtccggtcggacctgccc
gcggccttgcgcgacccggtggtgcgccggatcgagttcaagaacgatccgatcctggcc
tacacggtggcttcgtcgcgcctggacgaggaggcgctgtcctggttcgtcgacgaccgc
atcacgcggcgcctgctcgccgtgccgggggtcggggcggtcacgcgcgtcggggggctg
gaccgccaggtgcgcgtcgagctggacccggaccgcctgctggcctgggggctgagcgcg
gccgaggtgtcgcgccgtgtcgtgcaggcgcagcgcgaggcgcccgccgggcgcgtgctg
ctgggcagcggcgagcaggcggtgcgcacggtggtcgccgcgccgtcggccgaggccctg
gcggcattggagatcccgctgcccggcggcccggtgctgcgcctggaccagctggccacg
gtgcacgacggtcatgccgagcgccgcagcgcggcgttgctcgacggccggccggtggtc
ggcttcgagatccggcgcagcaccggcgccagcgacctggacgtggccgcaggcgtgcgc
caggcgctggccgagctgcaggcactgcacccggagctggaaatctccgaggcctggaac
gcgatcgacccggtggtcgagaacttcgagggcagcctgtcgctgctgctcgaaggcgcg
ctgctggcggtgctggtggtcggcatcttcctgcgcgacgcgcgcgccaccttcatcagt
gccgtggccctgccgctgtccatcctgccgaccttcctggtgatggagtggatggggttc
acgctcaacctggtcacgctgctcagcctgtcgctggtggtgggcatcctggtcgacgat
gccatcgtcgaggtcgagaacatcatgcgccacctggcccagggcaagtcgccgctggag
gctgcacgcgaggcggccgacgagatcggcatggcggtgatcgccaccaccttcacgctg
atcgcggtgttcctgcccaccgcgttcatgaaggggctggcggggcgctatttcgtgcag
ttcggctggacggcctcgatcgcggtgttcttctcgctggtggtggcgcgcctgctgacc
ccgatgatggcggcctacctgctgcgccggccggcgcggccgcaggccgagccgttctgg
atgccggcctacctgaaggccgcgcgctgggccttcacccacaagggggcgacgctggcg
gccaccgcggcgttcggcgtggcgtgcgcgctgccgctgctggcgggcgcgatccgcggc
gacttcatgccgcccgaggacggccaccagatccgcatcggggtcgagctgccgcccggg
gccacgctggcgcagacgcaggccgtggccgaggcggtgcgcgcggcggtggccacgcac
ccgcacgtgcggcaggtccatgccgcgatcggcggcggcagccgcgacgaccccctgggc
ggggcggcggaaagccgcacggccacgctgacgctgagcctcgtgccgcgccgggagcgt
cgcggcacgagccagcagcagatcgagcaggcgctgcgggcgcgcctgcaggacgtgccg
ggcgcccgcatcacgctcgcggcgagcgaggcctacaccttcgccctgtccggcgaggac
gccgagctgctggcgcagcatgcggcgcgcatcgagcaggagctgcgccgcctgccgggc
atcggccaggtcgcgagcagcgccagcctgcagcgtccggagctggtcgtgcgtgccgat
gcggcgcgtgcggccgaccggggcgtgagcgtcgaggcaatcgccgagacggtgcgcgtg
gcgacgctgggcgaccacgagcagttcctgccgcagctgagcctgagccagcgccaggtg
cccatcgtggtccggctgcccgaggccgccgcgcgcgacccggacctgctgggtcagctg
ccggtgccgggcgaacgcggcccggtgccgctgcgcgaggtcgccacgctggaggtggcc
agcggcccggcgcgcatccagcggctcgaccggttgcgcacggtgagtttctcggtcgag
ctcgacgggcggccgatgggcgaggtgcagcagcgggtcgcggcgctgcccggcctgcag
cagctgccgcccgggctgtcgaagctggacgtcggcgaggcggagacctccaacgagctc
ggccgcagcttcctgctcgcgatgggcaccggcgtggcctgcatctacatggtgctggtg
ctgctgttcggcgcctgggcgcagccgctgaccatcctgggcgcgctgctgctgtccgtt
cccggggcgctgctggcgctgtacctgaccggcacccacctcagcatgccggcgatgatc
gggatgatcatgctgatgggcatcgcgaccaagaactccatcctgctggtcgaatacgcc
atcgtcgcgcagcgcgatcgcggcctgccgcggctggatgccttgctcgacgcctgccgc
aagcgcgcgcgccccatcgtgatgaccacgctggcgatgggggcgggcatgctgcccatc
gcgctcggcttcggcgccgacccgagcttccgcgcgcccatggccatcgtcgtgatcggc
ggcctgctcacctccaccgtgctgagcctgctggtgatcccggtgctttacgaggtggtg
gacgatgccgtcgcgcggtgcaggcgaggccgccggcaggaggccgcggcatga
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