Sporosarcina thermotolerans: QNH10_06740 Help Entry QNH10_06740       CDS       T09050                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism stho  Sporosarcina thermotolerans Pathway stho03030   DNA replication stho03410   Base excision repair stho03420   Nucleotide excision repair stho03430   Mismatch repair Brite KEGG Orthology (KO) [BR:stho00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     QNH10_06740 (ligA)    03410 Base excision repair     QNH10_06740 (ligA)    03420 Nucleotide excision repair     QNH10_06740 (ligA)    03430 Mismatch repair     QNH10_06740 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:stho03032]     QNH10_06740 (ligA)    03400 DNA repair and recombination proteins [BR:stho03400]     QNH10_06740 (ligA) Enzymes [BR:stho01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      QNH10_06740 (ligA) DNA replication proteins [BR:stho03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      QNH10_06740 (ligA) DNA repair and recombination proteins [BR:stho03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      QNH10_06740 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      QNH10_06740 (ligA)    MMR (mismatch excision repair)     DNA ligase      QNH10_06740 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       QNH10_06740 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia Motif Other DBs NCBI-ProteinID:  WHT49291 LinkDB All DBs Position 1192349..1193617 Genome browser AA seq 422 aa AA seqDB search MDQKINRNEVEKRVRELNNLLKEYGHAYYVLDKPVVPDSVYDQHMQELLAIEAEHPDLIF PDSPSQRVGGEILSNFSKVVHEFPMLSLSNVFNEEDIRDFDRRVQAGAGHSITYICELKI DGLAVSLKYEKGNFIQGSTRGDGTIGEDITANLKTIHAIPLKLSEPITIEVRGEAYMPKK SFIKLNEMRDENGEEPFANPRNAAAGSLRQLDPKIAASRNLSVFIYGIGGDGSAYGQDSH SDSLDYLATLGFKTNTGSKRCSSIEEVIEYIESWQERRQDLDYEIDGIVIKVDGYEDQEQ LGFTARSPRWATAYKFPAEEVHTKLLDIELSVGRTGVVTPTAILEPVRVAGTTVARASLH NEDLIREKDIRIGDAVIIRKAGILSRKSSVFSLNNGQEWKNLTKCPIIARYVIPSLSGLM EK NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atggaccaaaaaataaatcgaaatgaagttgaaaaacgtgtgcgggaactcaataacctg ctcaaagaatatggacatgcctattatgtattagataagccggttgtccctgattctgtt tatgatcaacatatgcaggaactgttagccattgaggcggagcatccagatttgattttc ccggactctccatcgcaacgcgttggaggggaaatcctttctaacttcagcaaagtggtc catgaatttccgatgctgagcctatcgaatgtgtttaatgaagaggatattcgtgatttc gatagacgggtacaagcaggtgcaggccattccatcacgtatatttgtgaattgaagata gacggacttgccgtttcattaaaatatgaaaaaggcaatttcattcaagggtcgacacgt ggggacggaacaattggggaggacatcacagcgaacttgaagacaatccacgcgattcct ttgaaactgtcagaacctataacaatcgaagtccgcggtgaggcatatatgccgaaaaaa tcatttataaaattgaatgaaatgcgtgatgaaaacggtgaagagccattcgcaaatcca cggaatgctgcggcgggatcgttgcgacagcttgatccgaaaattgctgcaagccgcaac ctctccgtattcatatacggaatcggcggggatggaagtgcgtatggacaagacagccat tcggattcactcgattatcttgctacacttggatttaagacgaatacaggaagtaagcga tgcagttcaattgaagaagtgatcgagtatattgaatcttggcaggaacgcagacaggat ctagattatgaaatagatggcatcgtcattaaagtggatggctatgaagatcaggagcaa ttaggattcacagcaagaagtccaagatgggcgactgcttacaaattcccagcggaagag gttcatacgaaacttttagatatagaactgagtgttggtcggacaggcgttgtcacccct acagcgattttggaaccagtacgagttgccggaacgacagtggcaagggcatcccttcat aatgaggacttgatccgtgaaaaggacattcggatcggcgatgctgtcattattcgtaaa gcagggatattatcccggaagtcgtcagtgttctccttgaacaacggacaggaatggaaa aaccttacgaaatgcccgataattgcccggtatgtgattccgagcttatccggattgatg gagaagtag

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