KEGG   Streptomyces sp. ICC1: DRB96_26085
Entry
DRB96_26085       CDS       T10586                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
stii  Streptomyces sp. ICC1
Pathway
stii03030  DNA replication
stii03410  Base excision repair
stii03420  Nucleotide excision repair
stii03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:stii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DRB96_26085
   03410 Base excision repair
    DRB96_26085
   03420 Nucleotide excision repair
    DRB96_26085
   03430 Mismatch repair
    DRB96_26085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stii03032]
    DRB96_26085
   03400 DNA repair and recombination proteins [BR:stii03400]
    DRB96_26085
Enzymes [BR:stii01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DRB96_26085
DNA replication proteins [BR:stii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DRB96_26085
DNA repair and recombination proteins [BR:stii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DRB96_26085
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DRB96_26085
   MMR (mismatch excision repair)
    DNA ligase
     DRB96_26085
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DRB96_26085
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia RNA_lig_T4_1 ILEI HHH
Other DBs
NCBI-ProteinID: AWZ15148
UniProt: A0A2Z4V218
LinkDB
Position
5537239..5539449
AA seq 736 aa
MAAEQKQGSDTAVPAAVREQHALLAEQVEEHRFRYYVNDQPVVSDAEFDKLLRSLEALEE
QYTELRTPDSPTQKVAGAYETDFASVEHRERMLSLDNAFDDEELAAWAERVARDANTSDY
HYLCELKVDGLAVNITYENGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLKGDRIPALV
EIRGEVFFPMEKFEELNARLVEAEAKPFANPRNAAAGSLRQKDPKVTASRPLHMVVHGIG
AREGFEIERQSQAYELLHEWGLPTAQHNKVVSTLAEVREFIAEFGANRHSVEHEIDGVVV
KLDEIALQGRLGSTARAPRWAIAWKYAPEEVNSKLIDIKVGVGRTGRVTPYAQVEPVTVA
GSEVEFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVADLRDGSEREFVMPADCP
ECGTALRPMKEGDIDLRCPNARTCPAQLRERLFYLVGRACLDIKNFGYVASAALTQPLEP
SVPPMANEGDLFGLTLEQLLPITSYVRDQDSGLPKIDPKTGEPKIVTFFANKEGEPKANT
VAMLANIEAAKTQPLARIINGLSIRHVGPVAAAALARAFRSIERIEQATEEELAATDGVG
AIIATSVKEWFAEEWHQEILRKWRAAGVRMEEEGSGEEEGPRPLEGLTVVVTGTLQSHTR
DGAKEALQSLGAKVTGSVSKKTSFVVVGDNPGSKYDKAMQLKLHVLDDAGFAVLLAEGPE
AAREAALPVDGATEAE
NT seq 2211 nt   +upstreamnt  +downstreamnt
atggcagccgaacagaagcagggcagcgacacggccgtaccggcggcggtgcgcgagcag
cacgcgctgctcgccgagcaggtcgaggagcaccgcttccggtactacgtgaacgaccag
ccggtcgtcagcgacgccgagttcgacaagctgctgcgctccctggaggcgctggaggag
cagtacacggagctgcgcacgcccgattcgcccacccagaaggtggccggggcgtacgag
acggacttcgcctccgtcgagcaccgcgagcggatgctctccctcgacaacgccttcgac
gacgaggaactggcggcctgggcggagcgcgtggcccgggacgccaacacctccgactac
cactacctctgcgagctgaaggtggacggcctcgccgtcaacatcacgtacgagaacggc
cgcctgacccgcgccgccacccgcggcgacggccgcaccggcgaggacatcacgcccaac
gtccgcaccatcgcggagatccccgaccggctgaagggcgaccggatcccggcgctggtc
gagatccgcggcgaggtcttcttcccgatggagaagttcgaggagctcaacgcccggctg
gtcgaggcggaggccaagcccttcgccaacccgcgcaacgcggcggccggttcgctgcgc
cagaaggacccgaaggtcaccgcgagccgcccgctgcacatggtggtccacggcatcggc
gcccgcgagggcttcgagatcgagcgccagtcgcaggcgtacgagctgctgcacgagtgg
gggctgccgaccgcgcagcacaacaaggtggtctccacgctcgccgaggtccgggagttc
atcgcggagttcggcgcgaaccggcactcggtggagcacgagatcgacggcgtcgtcgtc
aagctcgacgagatcgccctccagggccggctcgggtccaccgcgcgcgccccgcgctgg
gcgatcgcctggaagtacgcgcccgaagaggtcaactccaagctgatcgacatcaaggtc
ggcgtcggccgcaccgggcgcgtgaccccgtacgcgcaggtggagccggtgacggtggcg
ggctcggaggtcgagttcgcgacgctgcacaaccaggaggtcgtcaaggccaagggcgtg
ctcatcggggacaccgtcgtcctgcgcaaggcgggcgatgtcatccccgagatcctcggc
ccggtcgcggacctgcgggacggcagcgagcgggagttcgtcatgcccgccgactgcccc
gagtgcgggaccgcgctgcggccgatgaaggaaggcgacatcgacctgcgctgccccaac
gcgcggacgtgtcccgcccagttgcgcgagcggctgttctacctggtcggccgcgcctgc
ctggacatcaagaacttcgggtacgtcgcctcggcggcgctcacccagccgctggagccc
tcggtccccccgatggcgaacgagggcgacctcttcggcctcaccctggagcagctgctc
cccatcacctcctacgtgcgggaccaggactcgggtctgcccaagatcgacccgaagacc
ggcgagccgaagatcgtcaccttcttcgccaacaaggagggcgagcccaaggccaacacg
gtggccatgctggcgaacatcgaggcggccaagacccagccgctggcccgcatcatcaac
ggcctgtcgatccggcacgtcggcccggtcgcggccgcggcgctggcccgcgcgttccgc
tccatcgagcggatcgagcaggcgaccgaggaggagctggccgccaccgacggggtcggc
gcgatcatcgcgacctcggtcaaggagtggttcgccgaggaatggcaccaggagatcctg
cgcaagtggcgggcggccggtgtccggatggaggaggagggttccggcgaggaggagggc
ccgcgcccgctggaggggctgaccgtcgtcgtcaccggcactttgcagagccacacccgc
gacggggcgaaggaggccctgcagagcctcggcgccaaggtcaccggctccgtgtcgaag
aagacctccttcgtcgtggtcggcgacaaccccggttccaagtacgacaaagccatgcag
ctgaagctccacgtcctcgacgacgccgggttcgccgtcctgttggcagagggcccggag
gcggcccgcgaggccgcgctcccggtggacggcgccaccgaagcggaatga

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