Selenomonas timonae: H1B31_09645
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Entry
H1B31_09645 CDS
T10113
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
stim Selenomonas timonae
Pathway
stim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H1B31_09645 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stim03400
]
H1B31_09645 (nth)
Enzymes [BR:
stim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H1B31_09645 (nth)
DNA repair and recombination proteins [BR:
stim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H1B31_09645 (nth)
Prokaryotic type
H1B31_09645 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QNH54108
UniProt:
A0A7G7VJ15
LinkDB
All DBs
Position
complement(2007937..2008566)
Genome browser
AA seq
209 aa
AA seq
DB search
MRVTKAIKAEQLHILRTLYPNAKPALEFKTPFELLIAVILSAQCTDVRVNIVTSRLFPRA
NTPEAIAALGQEQLEAAIHDCGFFRMKAKHILETCDILLQEYGGEVPADFEALQRLPGVG
RKTANVVMSVAFHAPAIAVDTHVFRVANRLRLAVGKTPLEVEKGLQKAIPREDWSDAHHW
LILHGRQRCKARKPLCGECPLAPVCPSAI
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagagtaacgaaagccatcaaggcggagcagctccacatcctccgcactctctatccc
aatgcaaagcctgcgctggaattcaagacgccgttcgaactcctcattgcggtgattctc
tcagcgcagtgtacggatgtgcgcgtgaatattgtgacgagcagactctttccgcgtgcg
aatacaccggaggcaattgccgcgcttgggcaggaacagctcgaggcagcgattcacgac
tgcggattcttccgcatgaaggcgaaacacattttggagacctgtgacatcctcctgcag
gagtatggcggcgaggttccggcagactttgaggccttgcagcgtctcccgggcgtcgga
cgcaagacggcaaatgtcgtgatgagcgtcgcctttcacgcacccgcgattgccgtcgac
acccatgtctttcgcgtggcgaaccgtctgcggcttgcagtcggcaagacgccgctcgag
gtggagaaggggctgcaaaaggcaatcccgcgtgaggattggagcgatgcgcatcactgg
ctgatcctgcacggacgtcagcgctgcaaggcgcgcaagccgctctgcggggagtgcccg
ctcgcaccggtctgtccgagtgccatttaa
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