Streptococcus salivarius JIM8777: SALIVA_0869
Help
Entry
SALIVA_0869 CDS
T02089
Symbol
nth
Name
(GenBank) putative endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
stj
Streptococcus salivarius JIM8777
Pathway
stj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SALIVA_0869 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stj03400
]
SALIVA_0869 (nth)
Enzymes [BR:
stj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SALIVA_0869 (nth)
DNA repair and recombination proteins [BR:
stj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SALIVA_0869 (nth)
Prokaryotic type
SALIVA_0869 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
AF1548-like_C
HHH_8
Transposase_20
Ogg-HhH
DUF1655
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
CCB95190
LinkDB
All DBs
Position
876280..876924
Genome browser
AA seq
214 aa
AA seq
DB search
MLGRKRVNEALALMGEMFPNAHGELDWETPFQLLVAVILSAQTTDKAVNKITPGLWARYP
EIEDLASANLDDVEMCLRTIGLYKNKARNIIKTARAVLMNFDGQVPKTHKELESLPGVGR
KTANVVLAEVYGIPSIAVDTHVSRVSKRLNIVPEDASVEEIEAELMKKIPKRDWIISHHR
MIFFGRYHCLAKNPKCQTCPLQSYCKYYKETTKK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgttaggaagaaaacgtgttaatgaggctctagctctcatgggggagatgtttcccaat
gctcatggagagctggattgggagactccttttcaactattagttgctgttattttatca
gcccagacaactgataaggctgttaataagattacaccaggcttgtgggcgcgttatcca
gaaattgaggatttggcttcggctaatcttgatgatgttgaaatgtgtttgcgaacaatc
ggtctttataagaataaggcaaggaacatcatcaagactgctagagcagttttaatgaat
tttgatggacaggttccgaaaactcataaggaattggaaagtctacctggtgtgggacga
aaaacagctaacgtagtattggctgaagtctatggcatcccttctattgctgtagatacc
catgtctcacgtgtatctaagaggctaaatatcgtgccagaggatgctagtgtagaggaa
atcgaagcggaactgatgaagaaaatcccaaagagggattggattatcagccatcaccgt
atgattttctttggacgctatcattgcttagctaagaatcctaagtgccagacatgtcct
cttcaaagttattgtaagtattataaagaaacaaccaagaaataa
DBGET
integrated database retrieval system
