Sphaerodactylus townsendi (Townsend's least gecko): 125425844
Help
Entry
125425844 CDS
T08213
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125425844 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125425844 (KDM2A)
04121 Ubiquitin system [BR:
stow04121
]
125425844 (KDM2A)
03036 Chromosome and associated proteins [BR:
stow03036
]
125425844 (KDM2A)
Enzymes [BR:
stow01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
125425844 (KDM2A)
Transcription factors [BR:
stow03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
125425844 (KDM2A)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125425844 (KDM2A)
Chromosome and associated proteins [BR:
stow03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125425844 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
125425844 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
DUF4820
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
125425844
NCBI-ProteinID:
XP_048339501
LinkDB
All DBs
Position
LG02:complement(69813491..69887294)
Genome browser
AA seq
1199 aa
AA seq
DB search
MAAAASIKGQRKARDLEEEEDDSSSDISFSLSSEESEMEPEEERIRYSKRLRGAMRRRYE
DDGISDDEIEGKRTFDLEEKLTTSKFNANFVVFMEGKDFTVEYIQRGGLRDPLIFKNSDG
LGIKMPDPDFSVSDVRLYVGSRRMVDVMDVNTQRDIEMTMAQWARYYETPEEEREKLYNV
ISLEFSHTRLESLVQRPTTVDLIDWVDNMWPRHLKESQTESTNAILDMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
DCQRIELKQGFTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYMYCITSRSHLTKDFQKESLSMDMELCNSESGNMDEDDVEAGKE
SRRPVTRRSILTSPVANGANLDYEELGKSCRNSPSLKRTMSMDSESSRGSHNGQAWDSHS
NSPHKGKKIHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKLLLEEYASS
DPKLALTGIPIVQWPKRDKLKLQVRPKLRLPTIPITKPHTMKPAPRPATVRPTVSPIVSG
ARRRRVRCRKCKACLQGECGMCHYCRDMKKFGGPGRMKQSCILRQCLAPRLPHSVTCALC
GEVDKNEDSQDFEKKLMECCICNEIVHPGCLRMDGEGILNDELPNCWECPKCYKGDESEK
GQKRKMDEGDDDTVQAKVLRPLRSCEEPLTPPPHSPTPMLQLIHDPVSPRGVVTRSSPGA
GPSDHHGASRDDRFKRRQLLRLQGTERTVVREKENNPSGKKELSEVEKAKLHGSYLTVTL
QRPTKDMHGTSIVPKLQAITASSTNLRHSPRVVMRQSSTRTPQRGGDEEAAEEDEEEESA
DEDDENTEDSGVARLNGQGGRAFDSEEIWMQKEVWMSVFRYLTRKELCECMRVCKTWYKW
CGDRRLWTKIDLSRYKSITPLALGGIIRRQPVSLDLSWTNISRKQLTWLIARLPGLKDLI
LAGCSWSAVSALSTSTCPLLRTLDLRWAVGIKDPQIRDLLTPPSDKPSQDNRSKLRNMID
FRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSTNLLTAVGSSTRNSLTEINMAG
CNKLTDQTLLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgcttctataaaagggcaaaggaaagccagagacctggaggaggaggaa
gacgacagcagttctgatatctccttctcactctcgtcagaagagtctgagatggagcct
gaagaagagcggatccgttatagcaaaagactgcgtggtgctatgagacgtcgttatgaa
gatgatggcatctcagatgatgagattgagggcaaacgaacatttgatctggaagagaag
cttaccaccagcaaatttaatgccaattttgttgtctttatggaaggcaaagatttcaca
gtggaatatattcagcgtggtggtttaagagaccccttaatcttcaagaattctgatgga
cttggaataaaaatgccagatccagacttcagtgtgagtgatgtacgactatacgtaggg
agtcggaggatggtggatgtcatggatgtgaatacccagagagacattgagatgactatg
gcacaatgggcacgctattatgaaactccagaggaggaacgtgagaagttgtataatgtt
atcagcctggagttcagtcatacccggcttgaaagcctggtacagagaccaacaacggtg
gatttaattgattgggttgacaacatgtggccaaggcatcttaaagaaagccagactgaa
tcaacaaatgccattctggatatgcagtatcccaaagtgcagaaatactgtttgatgagt
gtcaagggctgctatactgacttccatgtggacttcggtggtacttctgtgtggtatcat
attctcagagggggaaaggtcttctggttaattccacccactcctcagaacctggagtta
tatgaaaactggctgctctcagggaaacaaggggacatttttcttggtgaccgggtgtca
gattgtcaacgtattgagctcaagcaaggctttacctttgtcattccctcaggttggatc
catgcagtatacactcctacggacaccctggtttttggtggtaactttctgcatagcttc
aacatccctatgcaattgcggatttacagcattgaagatcgtacacgagtcccaaataag
tttcgttatcccttttattatgaaatgtgctggtatgtgctagagcgctatatgtactgc
attaccagccgttcccacctgactaaggacttccaaaaggaatcactcagtatggatatg
gagctgtgtaactcagagtctggaaatatggatgaagatgatgttgaagcaggaaaggaa
tcaaggcgtccagtcaccagacggtcaatactcactagccctgtggccaatggtgctaac
ctagactatgaggagctaggtaaaagctgccgaaattctccaagccttaagagaactatg
tccatggactctgagtctagcagagggtctcacaatggccaggcttgggattctcacagt
aacagtcctcataagggcaagaagatacatttgacacaatttgaactggagggtctgcgc
tgtcttgtagacaagctggaatctttgcccctgcacaagaagtgtgtacccactggcatt
gaagatgaggacgccctgattgctgacgttaagctattgctggaggaatacgcaagcagt
gaccccaaactggcacttactggaatccctattgtccagtggccgaagagggataagctc
aaacttcaggttcggccaaagttaagattacctaccatccctatcaccaagccccatacc
atgaaaccagccccacggcctgcaactgtgaggcccacagtctctcctatagtatctggt
gctcgcaggaggcgagtgcgatgtcgaaaatgcaaggcctgtctgcaaggtgaatgtggc
atgtgccactactgcagagatatgaagaagtttggtgggcctggtcgtatgaagcagtcc
tgtatattgcgacagtgtttggcgccccgactgcctcactctgtcacatgtgcactttgt
ggggaggtagataagaatgaggattcacaggactttgagaagaagttaatggaatgctgc
atctgcaatgaaattgttcaccctggctgtctacggatggatggggaagggatactgaat
gatgaattgcctaactgctgggaatgtccaaagtgctacaagggtgatgagtcggagaag
ggccagaagcgaaaaatggatgaaggtgatgatgacacagtccaagccaaagtcctgcgc
cctctacgaagctgtgaggagcctctgactccaccaccacactcacccaccccaatgctg
caattgatccatgaccccgtatcccctcgtggtgtggtgacacgatcctctccaggggca
gggcctagcgatcatcatggtgccagccgagacgaccggttcaagcgacgccagctgctt
cggctgcaaggcacggagcgcacagtggtgcgggaaaaggaaaacaaccctagtggcaaa
aaagagctttcagaggtagaaaaggccaagctccatggctcctatcttacagtcacgcta
caaagacctaccaaagacatgcatggcacttccattgtgcccaagctgcaggcgatcact
gcctcctccaccaatctgcggcactcaccccgtgttgtcatgcgccaaagttcaaccaga
acaccccagcggggtggagatgaagaggccgctgaggaagatgaggaggaagaaagtgca
gatgaagatgatgagaatactgaggatagtggagtagctagactgaatggtcaaggtggg
agggcattcgatagtgaggagatctggatgcagaaggaggtctggatgtctgtcttccgc
tatctcactcgcaaggagctctgtgaatgtatgcgtgtatgcaaaacctggtacaaatgg
tgtggtgacagaagattgtggacaaagattgatttgagtagatacaagtccatcacaccc
ttggctctaggtggcatcatcaggagacagccagtcagccttgacctcagctggaccaat
atttccagaaaacagcttacctggctcatcgccaggctaccaggcctcaaagacctcatc
ttagcaggctgttcttggtcagcagtttctgctcttagtacctccacttgccctcttctc
aggactctcgatcttcggtgggcagtaggaattaaggatccacagattcgggacttgctc
acacctccatcagataaaccaagtcaagacaatcgcagcaaactccgtaatatgatagac
ttccggttggctgggctggacattactgatgccacactccggcttatcatccgtcacatg
cctctcctatcacgacttgatcttagtcactgcaatcaccttacagaccagtcaacaaac
ttgttaacagctgtggggtcttccacacggaactcactcactgaaatcaacatggcaggc
tgcaataagctcacagaccagaccctgctgtatctgcggcgcatctcaaatgtcaccctg
atagacctgcgaggctgcaagcagattactcgcaaggcctgcgagcatttcatctcagac
ctgtcaatcaacagcctctactgcctgtctgatgaaaagctgatccagaaaatcagctag
DBGET
integrated database retrieval system
