Sphaerodactylus townsendi (Townsend's least gecko): 125426101
Help
Entry
125426101 CDS
T08213
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04115
p53 signaling pathway
stow04145
Phagosome
stow04148
Efferocytosis
stow04350
TGF-beta signaling pathway
stow04510
Focal adhesion
stow04512
ECM-receptor interaction
stow04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125426101 (THBS1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125426101 (THBS1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125426101 (THBS1)
04148 Efferocytosis
125426101 (THBS1)
09143 Cell growth and death
04115 p53 signaling pathway
125426101 (THBS1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125426101 (THBS1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125426101 (THBS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125426101 (THBS1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stow00536
]
125426101 (THBS1)
Membrane trafficking [BR:
stow04131
]
Endocytosis
Phagocytosis
Opsonins
125426101 (THBS1)
Glycosaminoglycan binding proteins [BR:
stow00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125426101 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
cEGF
EGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
125426101
NCBI-ProteinID:
XP_048340195
LinkDB
All DBs
Position
LG02:complement(127520308..127543629)
Genome browser
AA seq
1177 aa
AA seq
DB search
MELSGVLFLLLMLGLCAANRIPESGGDDNSVFDLFELIGFSRKGAARKVGGVYLAKGSET
SSPAYRIEDANRIPAVPDHKFQDILDSIQAEKGFILLANLRPMKKSPGTLLAVERKDNSG
YVFKLVLNGKAKTLDLSVFTKEGNQTLVSVEDVELPTWQWNNITLLVQEDQAQLYVGCEK
MVNAELEIPIQNVFTRDLASSARLRIAKGGVNDNFQGVLQNVRFVFGTTVEAILRNKGCE
SSTRTVIKLDNPMNGSSPAIRTNYIGHKTKDIQAICGFSCDELSNVFVELQSLRALVTTL
QDSVHKVIINNELASGPFQISPGACIHNKVVYQNTDEWTTDTCTTCTCQNSVVICHKVSC
PIMPCSNATVPDGECCPRCWPSDYAEDVWSPWSEWTTCSVTCGNGIQQRGRSCDSLNHRC
EGSSIQTRTCNMRECDKRFKQDGRWSHWSPWSSCSVTCGSGLITRIRLCNSPLPQMGGRQ
CEGEARETKSCHKDACPINGNWGPWSLWDTCAVTCGGGIQKRSRLCNNPEPQFGGKDCIG
DAVDTQICNKQDCPIDGCLSNPCFAGAKCTSFPDGSWKCGACPAGYHGNGVECKDIDECQ
EVPDACFVIGGVHRCENTEPGYNCLPCPSRFTGSQPFGRGVEHAIANKQVCKPRNPCTDG
THDCNKNAKCIYLGHFSDPMHRCECKPGYAGNGIICGEDTDLDGWPNKNLPCIANATYHC
NKDNCPNLPNSGQEDYDKDGIGDACDDDDDNDNIPDGLDNCPFIYNPQQYDYDRDEVGDR
CDNCPYNHNPDQIDTDSNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDLDGVGDQC
DNCPMEHNPDQTDSDSDRIGDKCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDV
CDHDDDNDGIPDDKDNCRLVANPDQLDSDGDGRGDACKDDFDKDNVLDIDDICPENVDIS
ETDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFF
VNTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWLDLPTKAQGYSGLSIKVVNSTTGPG
EHLRNALWHTGNTAGQVRTLWHDPHHNGWKDFTAYRWRLSHRPKTGYIRVVMYEGKRIMA
DSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggagttatcgggcgtcctctttctccttctgatgctcgggctgtgcgcagccaaccgg
attccagaatctggaggtgatgataacagtgtatttgatctatttgagctcattggtttt
tctcggaaaggagctgcacgcaaggtaggaggggtatatctggcaaagggatcggagacc
tccagccctgcctaccgcattgaagatgctaaccgtatcccagctgttccagaccacaaa
ttccaagacattcttgactctatccaagctgaaaagggcttcatcctattggctaatctt
cgcccaatgaagaagagccctggcaccttgctagctgtggagcgcaaggacaactctggc
tatgtgttcaagctggtgttgaatggcaaggcaaaaaccttggacttgagtgtctttacc
aaagaaggcaatcagactttggtgtcggtggaagatgttgagttgcctacctggcaatgg
aacaacattacccttttagttcaggaggatcaggcccagctctatgtgggatgtgagaag
atggtgaatgctgaactggaaatcccaattcagaatgtcttcaccagggacctggccagc
agtgccagacttcgtattgccaaagggggagttaatgacaacttccagggagtgctacag
aatgtaagatttgtatttggaactactgtggaagccatcctgagaaacaagggctgtgaa
agctccactagaacagtaattaaactggacaatcctatgaatggctccagtccagctatc
cgcactaactacattggccacaaaacaaaggacatccaggccatttgtgggttctcctgc
gatgagctaagcaatgtgtttgtagaattacaaagtctgcgtgctctggttacgacactt
caagattcagtccacaaagtgattataaacaatgaacttgccagtggtccttttcaaatt
agtcctggagcatgcatccataataaagttgtgtaccaaaacactgatgagtggaccaca
gatacatgcacaacctgtacttgccagaactctgttgtcatctgccataaagtgtcttgc
cctatcatgccttgttcaaatgccactgttcctgatggagaatgctgcccacgatgctgg
cctagtgactatgcagaggacgtttggtctccgtggtccgaatggactacttgctctgtg
acctgtggcaatggcattcaacagagaggccgttcttgtgatagcctcaaccatcgctgt
gaaggctcttccatacaaactcgtacctgcaatatgcgggaatgtgataagagattcaaa
caggatggtcgctggagtcattggtctccttggtcttcttgctctgttacttgtggatct
ggcttgatcactagaatccgtctctgcaactctccgcttcctcagatgggaggtagacag
tgtgagggagaggcaagagaaactaaatcttgccataaagatgcttgcccaataaatggg
aactggggaccatggtcactgtgggacacctgtgcagtcacatgtggagggggcattcag
aagcgtagccgtctctgcaacaatcctgaaccacagtttggagggaaggactgtattggt
gatgctgtagacactcaaatctgcaacaaacaagattgtccaattgatgggtgcctatct
aatccctgctttgctggagcaaaatgtactagtttcccggatggttcttggaaatgtggt
gcctgccctgctggttatcatggaaatggagttgaatgcaaagatattgatgagtgtcaa
gaggtccctgatgcctgctttgtaattggtggagtgcacaggtgtgagaatactgagcca
ggatacaattgcctaccttgcccatcacgttttactggaagtcagccctttggtcgaggt
gtggagcatgcaatagcaaacaagcaggtctgcaaaccaagaaacccctgcactgatggt
acacatgactgtaataagaatgcaaagtgcatttaccttggccactttagcgaccccatg
catcgctgtgaatgtaaaccaggctatgctggtaatggtattatctgtggagaagataca
gatttagatgggtggccgaataagaaccttccttgcattgccaatgctacataccactgc
aataaagacaactgccccaaccttcctaattctggacaggaagactatgataaggatgga
attggtgatgcctgtgatgatgacgatgataatgacaatattccagatggcttggacaat
tgcccattcatttacaacccacaacagtatgactatgacagagatgaagttggtgatcgc
tgtgataactgcccctacaatcacaacccagatcagatagacactgatagcaatggagaa
ggagatgcctgtgctgttgatattgatggagatggcattcttaatgaaagagacaactgc
cagtatgtgtacaatgtggatcagaaagatacagacttggatggtgttggagaccagtgt
gacaactgtcctatggagcacaatccagatcagacggattctgactctgaccgcataggt
gataaatgtgatagtaaccaagatattgatgaagatggtcatcaaaataatcttgataat
tgtccctatgtgccaaatgctaaccaagctgaccatgacaaagatgggaaaggggatgtc
tgtgaccatgatgatgataatgatggaatccctgatgacaaagataactgcagactggtt
gcaaatccagatcagttggactctgatggggatggacgtggagatgcatgcaaagatgac
tttgataaagataacgtgctagacattgatgacatctgccctgaaaacgttgacatcagt
gagacagacttccgtcgatttcagatggttcccctggatcctaagggaacgtcccaaaat
gatcccaactgggttgttcgtcaccaaggcaaagaactggttcagactgtcaactgtgat
cctggacttgcagttggttttgatgaatttaacgctgttgacttcagtggcacattcttt
gttaatactgaaagagatgatgactatgctggctttgtgtttggatatcagtctagcagt
cgcttttatgtagttatgtggaaacagatcacacagtcttactggcttgatttaccaacc
aaagcccaaggatattctggcctttctattaaagtagtaaactccaccactggtcctgga
gaacaccttcgtaatgcactgtggcatactggaaatacagctggacaggtgcgaactctg
tggcatgaccctcatcacaatggatggaaagatttcactgcctacagatggcgactcagt
cacagacccaagactggctacattagagtggtaatgtatgaaggaaagaggatcatggct
gattcaggccccatttatgacaaaacctatgctggtggtcggttaggattatttgtcttc
tctcaagaaatggtgttcttctcagatcttaaatatgaatgtagagatccctga
DBGET
integrated database retrieval system
