Sphaerodactylus townsendi (Townsend's least gecko): 125427739
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Entry
125427739 CDS
T08213
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04010
MAPK signaling pathway
stow04060
Cytokine-cytokine receptor interaction
stow04150
mTOR signaling pathway
stow04210
Apoptosis
stow04217
Necroptosis
stow04350
TGF-beta signaling pathway
stow04620
Toll-like receptor signaling pathway
stow04621
NOD-like receptor signaling pathway
stow04622
RIG-I-like receptor signaling pathway
stow04625
C-type lectin receptor signaling pathway
stow04920
Adipocytokine signaling pathway
stow05132
Salmonella infection
stow05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125427739
04350 TGF-beta signaling pathway
125427739
04150 mTOR signaling pathway
125427739
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125427739
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125427739
04217 Necroptosis
125427739
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125427739
04621 NOD-like receptor signaling pathway
125427739
04622 RIG-I-like receptor signaling pathway
125427739
04625 C-type lectin receptor signaling pathway
125427739
09152 Endocrine system
04920 Adipocytokine signaling pathway
125427739
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125427739
09171 Infectious disease: bacterial
05132 Salmonella infection
125427739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stow04052
]
125427739
00536 Glycosaminoglycan binding proteins [BR:
stow00536
]
125427739
Cytokines and neuropeptides [BR:
stow04052
]
Cytokines
Tumor necrosis fators
125427739
Glycosaminoglycan binding proteins [BR:
stow00536
]
Heparan sulfate / Heparin
Cytokines
125427739
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
125427739
NCBI-ProteinID:
XP_048343251
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Position
LG03:20789705..20794767
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AA seq
263 aa
AA seq
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MSSEQLVYDVEKGSKMVAAHPSRQDSHWKCLSICSFLLLVGAVTVFTLLQFGAFGSSADQ
NSKENGNPFPARLSEFQNCFEEQTLIRQQFLFAEGMPQTLRVRAAASGKPAIHAIASRSH
LDNLIWITGLLPAMDRNMKLDKTENALVVPSTGLYFVYSQLLFHGENCREHSESPLLLTH
TISSKSTTFGRTTVDLMKTVKSVCESENTSQGHNKLWFESIYQGGVFQLQEGDKLFSNTE
STKYLDRDREGQLYFGAVALDLY
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgagcagttggtgtacgacgtggagaaaggcagcaaaatggtcgcggcgcac
ccgtcgcgccaagatagccactggaagtgcctgagcatctgctctttcctgctcctcgtt
ggggccgtcactgttttcactctgctgcagtttggagcgtttgggtcctcagcagaccag
aactctaaagaaaacgggaacccgttccctgctagactatcagaatttcaaaactgcttt
gaggaacaaaccctgatccgacaacaatttctctttgcagaaggaatgccccagacgctg
agagtgcgagcggctgcatctgggaaacctgctatccatgccatcgcatccagatctcac
cttgacaatctaatctggattactgggttgttacctgccatggataggaacatgaagctc
gacaagacggagaacgcgctcgtggtgccttccactggactctattttgtctactctcag
ctcttgttccatggagaaaactgcagagaacactctgaaagccctctgctgctcacccac
accatctctagtaagtccacaacgttcggacggaccacggtggacttgatgaagacagtc
aaatccgtctgcgagagtgaaaacaccagccaaggtcataacaagctctggttcgagtcc
atctatcaaggaggtgttttccagctacaagaaggagataagctgttctcaaacacagaa
tccaccaaatacctggacagggatcgagaaggacagctgtattttggggccgtagccctg
gatctgtattaa
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