Sphaerodactylus townsendi (Townsend's least gecko): 125428510
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Entry
125428510 CDS
T08213
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125428510 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stow01007
]
125428510 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stow03016
]
125428510 (IARS1)
Enzymes [BR:
stow01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
125428510 (IARS1)
Amino acid related enzymes [BR:
stow01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125428510 (IARS1)
Transfer RNA biogenesis [BR:
stow03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125428510 (IARS1)
Prokaryotic type
Other AARSs
125428510 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
125428510
NCBI-ProteinID:
XP_048344645
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All DBs
Position
LG03:complement(62796757..62912241)
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AA seq
1264 aa
AA seq
DB search
MVQQVAENINFPQEEEKILQIWNTLNCFQECLKQSKNRPRFTFYDGPPFATGLPHYGHLL
AGTIKDIVTRYAHQSGFHVERRFGWDCHGLPVEYEIDKALGIKGPEDVAKMGIAEYNNHC
RGIVMRYSQEWKVSVTRLGRWIDFDNDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLEEDESISLVAWTTTPWTLPSNLALCVNS
ELQYVKVKDKNTGKIFILMEARLVSLYKSENEYVILDRFPGISLKGKKYKPLFEYFIKCK
ENGAFTVVTDSYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTA
EVTDFAGQYVKDADKNIIKNLKEHGRLIHSGSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLENNAQCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSSDFEEVVC
IGSVAELEELSGVKVTDLHRESVDQITIPSRCGKGVLRRVSEVFDCWFESGSMPYAQVHY
PFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPVTIVNSYGADALRLYLINSPVVRAENLRFKEEGVREVLKDVFLPWYNAY
RFLIQNVVILQLKEDGKEFLYNENTVKENNNVMDKWILSFTQSLIQFFKTEMAAYRLYTV
VPRLVKFVDILTNWYVRMNRRRLKGENGTDDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTDSIHYLMLPQVREDLIDKSIESAVSRMQSVIELGRVIRDRK
TIPVKYPLKEVVVIHHDPQALEDIRSLEKYILEELNVRQVTLSTDKDKYGIRLRAEPDHM
VLGKRLKGAFKSVMVAIKELTSEQLEEFQKTGTIVVEGHELYEEDLRLMYTFDQAVGGSA
QFEAHSDSQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYQAQPEG
DYLDTVIKEHTDFIFATIKAALKAYPVPTSIEVLIQEKTQLKGSELEITLAKGALHRCIE
PACNYVILNISVNGKEQDGMVLLENPKGDNKLDFSKLVNAISSIFGLENSKLAIFSGKTE
LKNQTDLVSLSGKTLHVTSGSAPALNHPNGSLCQYINLLLVNAKPQECLKGMVGTLLMEN
PIGQNGLTYQGLLHETGKVFGLRNRRLKLFLDEALKEEITKESSMKALNTKTVYVHVAPT
TAEY
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttgcagagaatataaactttccacaggaggaagagaaaatattacag
atctggaacacgctgaattgttttcaagaatgcctgaaacagtcaaaaaacaggcctagg
tttacattctatgatggccctccatttgctacaggccttccacattacggacacttactt
gcaggaactattaaagacatagtcactagatatgctcatcaaagtggctttcatgtggaa
agaagatttggttgggattgccatggcttgccagtggaatatgaaattgacaaagcatta
gggatcaaaggtcctgaagatgtggcaaaaatgggaatagctgaatataacaaccattgc
agaggaattgtgatgagatattcacaagaatggaaagtcagtgttacaaggcttggccgg
tggattgactttgacaatgactataaaacactgtatccagagttcatggaatctgtgtgg
tgggtttttaaacagctatatgacaaaggactggtatacagaggagttaaagtcatgcct
ttctcaacagcatgcaacacacccctttctaactttgaatctcaccagaattataaggat
gtgcaagacccttcagtcattgttagctttccacttgaagaagacgaaagcatctctctt
gttgcttggacaacaaccccttggactctgcctagcaacttggctctctgtgttaattca
gaattgcagtatgtgaaggtgaaagacaaaaatacagggaaaatcttcattttgatggaa
gcaaggctggtatccctctacaaatctgaaaatgaatatgtaatacttgacaggtttcca
ggcattagtcttaaagggaagaaatataagcctctttttgagtattttattaagtgcaaa
gaaaatggtgcttttacagtagtgactgacagctatgtgaaggaagaagaaggtacaggg
gttgtacaccaagctccttactttggcgctgatgactacagagtctgcatggattttaat
attattcaaaaagattcagtgcctgtttgtcctgttgatgcctcaggctgcttcactgca
gaagtgacagactttgctggacaatatgtgaaggatgcagataaaaacattatcaagaac
ctaaaagaacatggtagactgatccacagtggctctttcaagcacagctatcctttttgc
tggaggtcagatactccattaatatacaaagcagtgccaagctggtttgttcgtgtggag
cacatggtggacaagctgctggaaaataatgcacagtgctattgggttcctgaattcgtg
agagaaaagcgatttggaaactggttaagagatgctcgggactgggctatttcacgaaac
agatactgggggacacccatcccattgtgggtcagcagtgattttgaagaggtggtctgc
ataggatctgtagcagagctggaagagctgtcaggagtaaaagtaacggatctccacagg
gaaagtgttgatcaaataaccattccttcacgctgtggcaaaggtgtgctgcgccgtgtt
tcagaagtttttgactgctggtttgagagtggaagcatgccttatgcccaggtccattat
ccatttgagaataagagagaatttgaagatgcttttcctgctgacttcattgctgaaggc
attgatcaaactagaggatggttttacactttactagtgttatctacagctctttttggg
aagcctcctttcaagaatgtcattgtaaatggcctagttcttgccagcgatgggcaaaag
atgagcaagcgaaagaagaattaccctgatccagtaaccattgtaaactcatatggggct
gatgcactaaggctgtacctcatcaattctcctgtagtaagagcagaaaacctgaggttt
aaagaagaaggggtgagagaggtgctgaaggatgttttcctgccatggtacaatgcatat
cgcttcctcattcagaatgttgtcattctgcaacttaaggaggatggaaaggagttcctt
tacaacgagaacacagttaaagaaaacaacaacgtcatggataagtggattctttcattc
acccagtcactcattcagtttttcaaaacggaaatggcagcctacaggctatatactgtg
gttcctcgactagttaagtttgttgacatccttaccaactggtatgtcagaatgaatcgc
aggaggctaaagggtgaaaatggaactgatgactgcatcatggccttagaaaccttattc
agcgttctcttctcaatgtgcagacttatggcaccttacactccatttatcactgaactg
atgtaccagaatttgaagactctgattgatccagcttcagttcaggagaagaacacagat
agtattcactacctcatgcttcctcaagttagggaggatctgatagacaaaagtatagaa
agtgcagtttcccgaatgcagtctgttattgaacttgggcgggtaatcagagatagaaaa
accattccagtaaagtatcccctgaaagaggtcgttgtcatccatcatgatcctcaggca
ctggaagatatcaggtccttggagaagtatatactagaggagcttaatgttcgtcaagtg
acattatcaactgataaggataagtatggcattcgactcagagcagaacctgatcacatg
gtgcttgggaagcgcctgaaaggtgcctttaaatctgttatggttgctatcaaggagctg
acaagtgaacagctggaagaattccagaagacaggcaccattgttgtggaaggacatgaa
ctgtatgaggaagatcttcgtctgatgtacacctttgaccaggctgtaggaggatctgcc
cagtttgaagcacattcagattctcaggttttggttctgttggatgttactcctgatcag
tccatggtcgatgaaggtgtggcacgtgaagtaataaatcgcatccagaaacttcggaaa
aagcgcaatctagttcccactgatgagattacggtatactatcaagcacaaccagaagga
gattatcttgatactgtgattaaggagcatacagatttcatttttgcaacaataaaggca
gccctgaaggcatacccagtgcctacctcaatagaagtgcttattcaagagaaaacccag
ctgaagggatctgaactggaaattacccttgcaaagggagctttacaccgctgtattgag
ccagcatgtaattatgtcattctcaacatcagtgtcaatggtaaagaacaagatggtatg
gtgctgttggaaaatcctaaaggagataataaattagacttcagcaaactggttaatgcc
atctcatccatttttggtctggaaaattcaaagcttgctattttcagtggaaaaacagaa
ctgaaaaaccaaactgacctggtaagcctcagtggaaaaacacttcatgtgacttcaggg
tcagctccagctttgaaccatcctaatggttccctctgtcagtatataaatttactgcta
gtgaatgcaaaaccacaagaatgtctgaaaggaatggtgggaacccttctcatggaaaat
cctattggtcagaatggactgacctatcaagggctcctacatgaaacaggaaaagtattt
gggctcagaaaccggagactaaaattgttccttgatgaagcattaaaagaggagattaca
aaagagagctccatgaaggccctaaatacaaagactgtttatgttcatgttgcaccaaca
acagctgaatattga
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integrated database retrieval system
