Sphaerodactylus townsendi (Townsend's least gecko): 125430285
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Entry
125430285 CDS
T08213
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stow04121
]
125430285 (RNF123)
Enzymes [BR:
stow01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125430285 (RNF123)
Ubiquitin system [BR:
stow04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125430285 (RNF123)
Multi subunit type E3
KPC complex
125430285 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
125430285
NCBI-ProteinID:
XP_048348153
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All DBs
Position
LG03:71436004..71546153
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AA seq
1315 aa
AA seq
DB search
MTSRGAGTSFSRKNYRLSTEPEKAKIAGIVNSKLLNDYLHRIFPSSDGIQPAAGHRRYLS
FQNLQEHIERLLAGNAGSEDGQDQMVEGRLGPSVVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGNISFCLNGVSLGIAFENISRGSGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYQPLQDRPIADLVKAQKLLEYLKNVIHTEIDVSEGKLME
RDSAMWQLQGEPTVLITLAHIFNNFSPLMCKVYLVEDVLMNFLLGILEGGGSVEAHPLIQ
QLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIAPDLSLQIHYLRLTIAVLKHEKSRK
YLLQNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFNKEGKESKEIKDETAEE
RLRRRAYERGCQRLKKRIEVVEELQVQILKLLLNNKDRGGGGASRYIFLNKFHKFLQENA
SNRGNLTVLCPPEYMVCFLHRLIAALRHYWDEHKMKSLSALSSEDAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLASKANIVIDPAELQAVTMDDLDEDEESSVSTSQRPAAAL
AIGGALARPSWLSSPTLGRANRFLSTAAVSLMNPRRSPGTMEKVKVRTLNMEQRTEEDIE
GSHGNDGLLLGKPAEEPEQPITENSLLEILDGIVMMYNLSVHQQLGKMVGVSDDVNEYAL
ALKDTEEKMSRCPKRRRDIYDELVKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIYWL
LRVCVRTIEHGDRIGSLFAFMPEFYLSVVMNSYSALKNYFSPVNSMEDLPGYEETLMRLA
AILAKHFADPRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPYEQR
PWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDVNLPSLQRDLSVASFQKPCPSTLLQ
RHMADLLCSDREMAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCA
TCFDLSVSLLRVLEMTVTLAPEIFLDWSRPSSELLLRRLAQLLNQVLNRVTAERNLFDRV
VNLRLPGLESVDHYPILVAVTGILVRLLVDTDFQGAERATAVLLADPCFQLCSIQYLLGH
TEPLVLGTASSSADKKHFSLQSYTDYISQEELAKVEQMLGHLSEESKQAAASTLPTSEED
LCPICYAHPISAVFKPCSHKSCKACINQHLMNNKDCFFCKATITGVDDYIKPPTS
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaagaggggctggcacatctttttctcggaaaaactacagattaagcacagag
cctgaaaaggccaagattgcaggaatagtgaacagcaaacttctgaatgattatctgcat
cgtattttccccagttctgatgggattcagccagctgctggacacagaaggtacctttca
ttccaaaatttacaggaacacatagaacgactgctagcagggaatgctggctccgaagat
ggtcaagatcagatggtagaaggcagacttggtccttctgttgtggtactggatcataca
agtggttttgagggactcctgctggtggatgatgatcttcttggggtgattggacatagt
aactttggttccatcagagccacaacctgcgtatataaaggaaaatggatctatgaggtg
ctgatttcatcccaaggcctcatgcagattggctggtgtactctcaattgtcgattcaat
caagaggaaggagttggagatactccagattcatatgcctatgatgggaatcgagtgcgc
aaatggaatgtaactacaaccaactatggtaaatcttgggcagccggagatattgtcagc
tgtttgatagacctggatgagggaaacatttctttttgcctgaatggcgtatctctgggg
attgcttttgagaacatttcccgtggctctggcatggcctatttccctgccatcagcttg
tcattcaaggaatccgttgcttttaactttggcagccgcccacttcgatatccagttgag
ggatatcagcccttacaggacagacccattgcagatctggtaaaagctcagaagctgttg
gaatatctgaaaaatgttattcatactgaaatagatgtttcggaagggaagcttatggag
agggactctgccatgtggcaacttcagggggaacccacagtactgatcaccttggcacac
atttttaacaacttttcccccctcatgtgcaaagtgtacttagtagaagatgtgcttatg
aacttcctacttggcatcctagaagggggagggtctgtggaagcgcaccctctcattcag
cagttattggatctcatgtggcttctcatggaggagtatgaagtacacgaatgcctcaaa
cagctgctgatgtccctgctcagggcgtaccgtttctctcccatcgctcctgacttaagc
ttacagattcactacctccgtctcactattgctgtcctgaagcatgagaaatccaggaaa
tacctgcttcaaaatgtcctatttgatgtgctacgctcagttgtgtttttctacatcaag
agtcccttgcgggtggaagaagctggcctgcaagagctcattcccaccacttggtggcca
aaccgtttcaacaaggagggcaaagagagtaaagagattaaggatgaaactgctgaggag
agactgagacgacgagcgtatgagagaggttgccagaggcttaagaaacggattgaagtg
gtggaggaactccaagtgcagatcctaaagttgctgttaaacaataaagatcgaggtggg
ggaggagcttccagatatatctttcttaacaaattccacaaatttctgcaggaaaatgct
agtaaccgagggaatctgactgtcttgtgccccccagagtacatggtgtgcttcttacat
cgacttattgcagccttgagacattactgggatgagcacaagatgaagagcctttcagca
cttagcagtgaagatgcttatgtcccccctcagctcttctataatgggaaagtggattac
tttgatcttcaaagacttggaggactcctgtctcatctcaaaaagactctcaaagatgac
ttggcctcaaaggcaaatattgtgattgaccctgcagagcttcaggctgtgaccatggat
gacctcgatgaagatgaagaatcatcagtgtcaacatcacaacgtccagctgctgctttg
gcaattggaggtgcccttgccaggccaagctggctcagttcacccactctggggcgagct
aaccgttttctcagcactgcagctgtcagccttatgaatcccaggcggtcaccaggcacc
atggagaaggttaaagtccgtaccttgaacatggaacagcggacagaagaggacattgaa
ggcagccatggaaatgacggcctcttgctggggaaacctgcagaagagccagaacaacca
ataacagagaactctctgctggaaatcttggatggaatagtcatgatgtacaacctcagc
gtgcatcagcagcttggtaagatggtaggtgtttccgatgatgtgaatgagtatgctttg
gcactgaaagacactgaagaaaagatgagccgatgcccgaagaggagaagagatatctat
gatgagctagtgaagagtcagaaggttttttctgagaagcttaatcacctgagtcggcgt
cttgcttggatcaatgttactatttattcaaaggagaagatgcaagatatatactggttg
ctgcgggtgtgcgtccgcactattgaacatggagacaggattggctcgctctttgcattt
atgccagaattttatctgagtgtggttatgaatagctacagtgctctcaagaactacttc
agtcctgtcaatagcatggaggaccttccaggatatgaagagactttgatgcgccttgct
gccattttagcaaagcactttgctgatccacggattgtgggcactgatatcagggactcc
ctgatgcaagcgctggccagctatgtttgctacccccactctctccgtgctgttgagagg
atcccagaagagcagcgaatatccatgatgaagaacttgctggccccctatgagcaaagg
ccctgggcccagaccaactggatccttgtgcgactgtggcggggctgtggatttggatat
aggtacacacgacttcctcatctgctgaaaaccaagcccgaggatgtgaatctccccagt
ttgcagagagatctctctgttgctagtttccagaagccttgcccttccaccttgctgcag
cgacacatggcagacctcctgtgcagtgaccgtgaaatggcacctagcttcctcaacagt
gtccttaaccaactgaactgggccttttcggagttcattggcatgattcaggagatccag
caggctgcagagcgcttggaaagaaattttgtggacagccgtcagctgaaggtgtgtgca
acatgttttgacctgtcggtgagccttctcagggtactggaaatgactgtcactctggct
cctgaaatcttcctggactggagtcgcccctcatcggagctgttactcaggagacttgca
cagctgttaaatcaggtgctgaatcgtgtgacggctgagcgcaacctgtttgacagagtg
gtcaatctccgcctgccaggactggagagtgttgatcactacccaatccttgtggctgtg
acaggaattctggtccgactcctggttgatactgattttcaaggggctgagcgggcgaca
gctgtgctgttggcagatccctgtttccagctctgttctattcagtacttgctgggtcac
acggagcctttagtactgggaacggcatcttcttctgctgacaagaaacacttctctctg
caaagctacactgactacattagccaggaagagctagccaaggtggaacaaatgctgggt
catctgagtgaagagtccaagcaggctgcagcttctaccttgcccaccagtgaggaggac
ctatgccctatctgctatgctcatccaatttctgctgtgttcaagccatgctcccacaag
tcctgcaaagcctgtatcaaccagcacctgatgaacaacaaggactgtttcttctgcaaa
gccaccattacgggtgtggatgattacattaagccacccacctcctag
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