KEGG   Sphaerodactylus townsendi (Townsend's least gecko): 125431726
Entry
125431726         CDS       T08213                                 
Symbol
ACTB
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
stow  Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow03082  ATP-dependent chromatin remodeling
stow04145  Phagosome
stow04210  Apoptosis
stow04510  Focal adhesion
stow04520  Adherens junction
stow04530  Tight junction
stow04810  Regulation of actin cytoskeleton
stow04814  Motor proteins
stow04820  Cytoskeleton in muscle cells
stow05100  Bacterial invasion of epithelial cells
stow05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:stow00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125431726 (ACTB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125431726 (ACTB)
  09143 Cell growth and death
   04210 Apoptosis
    125431726 (ACTB)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125431726 (ACTB)
   04520 Adherens junction
    125431726 (ACTB)
   04530 Tight junction
    125431726 (ACTB)
  09142 Cell motility
   04814 Motor proteins
    125431726 (ACTB)
   04820 Cytoskeleton in muscle cells
    125431726 (ACTB)
   04810 Regulation of actin cytoskeleton
    125431726 (ACTB)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125431726 (ACTB)
   05100 Bacterial invasion of epithelial cells
    125431726 (ACTB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stow03021]
    125431726 (ACTB)
   03019 Messenger RNA biogenesis [BR:stow03019]
    125431726 (ACTB)
   03036 Chromosome and associated proteins [BR:stow03036]
    125431726 (ACTB)
   03029 Mitochondrial biogenesis [BR:stow03029]
    125431726 (ACTB)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:stow04812]
    125431726 (ACTB)
   04147 Exosome [BR:stow04147]
    125431726 (ACTB)
Transcription machinery [BR:stow03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125431726 (ACTB)
Messenger RNA biogenesis [BR:stow03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125431726 (ACTB)
Chromosome and associated proteins [BR:stow03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125431726 (ACTB)
    NuA4 complex
     125431726 (ACTB)
  Chromatin remodeling factors
   BAF complex
    125431726 (ACTB)
   PBAF complex
    125431726 (ACTB)
   GBAF(ncBAF) complex
    125431726 (ACTB)
   SWR1 complex
    125431726 (ACTB)
Mitochondrial biogenesis [BR:stow03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125431726 (ACTB)
Cytoskeleton proteins [BR:stow04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125431726 (ACTB)
Exosome [BR:stow04147]
 Exosomal proteins
  Proteins found in most exosomes
   125431726 (ACTB)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125431726
NCBI-ProteinID: XP_048350744
LinkDB
Position
LG04:151560962..151567039
AA seq 375 aa
MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggacgatgatattgctgcactcgttgttgacaatggctctggaatgtgcaaagccggt
tttgctggggacgatgcaccccgtgccgtgttcccctccattgtgggtcgccccaggcac
cagggtgtgatggttggaatgggccagaaggacagctatgtcggtgacgaagcgcagagc
aaaagaggcatcctcaccctgaagtaccccattgaacacggcattgtcaccaactgggac
gacatggagaagatctggcaccacaccttttacaacgagctgagagtggcccccgaggaa
caccccgtgcttctaacagaggctcccctgaaccccaaagccaacagagaaaaaatgaca
cagatcatgtttgagaccttcaacaccccagccatgtacgtcgccatccaagctgtgctg
tccctgtatgcctctggccgtaccactggcattgtgatggactctggtgatggcgtcacc
cacactgtgcccatctacgaaggttatgctttgccccatgccatcctccgtctggatctg
gctggccgcgacttgaccgactacctcatgaagatcttgaccgagagaggctacagcttc
accaccacagccgagagagaaattgtgcgtgacatcaaagagaagctgtgctacgttgcg
ctcgactttgagcaggagatggccaccgctgcgtccagctcctccctggagaagagctat
gagctccccgacggacaggtgatcaccatcggaaacgagaggttcaggtgcccggaagcc
ctcttccagccttctttcctaggtatggaatcctgcggtatccacgaaaccaccttcaat
tcgatcatgaaatgcgacgttgatatccgtaaagacctgtatgccaacactgtcctgtct
ggtggtactacaatgtaccctggcatcgcggacaggatgcagaaggagatcacagccctg
gcgcccagcacaatgaaaatcaagatcattgctccccctgagcgcaaatactctgtctgg
atcggaggctccatcctggcctccctgtcaaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggaccgtccattgtccaccgcaaatgcttctaa

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