Sphaerodactylus townsendi (Townsend's least gecko): 125432379
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Entry
125432379 CDS
T08213
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04382
Cornified envelope formation
stow04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125432379 (PKP1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125432379 (PKP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stow04812
]
125432379 (PKP1)
Cytoskeleton proteins [BR:
stow04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
125432379 (PKP1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_GCN1
HEAT_EZ
HEAT
ZER1-like_2nd
WRM1_C
HEAT_2
V-ATPase_H_C
ARM_PUB
SYS1_M
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
125432379
NCBI-ProteinID:
XP_048351799
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All DBs
Position
LG05:96851966..96915528
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AA seq
733 aa
AA seq
DB search
MLHSPSPLKTALAYECFQDQANSTLALPSDHKLKTRGTGKQRVQEQVMMTVKRQKQKSSL
SSNTGHSNRGSIYDGLSDGYSYGTARGSYYGKAHTGNNWGHGLYNGTIKRDTENKRYSSY
SQMESWGSKHYNKMCSPTSPGSDYCFVNLKSSRSEPDLYYDPPRSTLRRNQSGSRMGHKA
TLNRNSIYSSYNNQGTITTTRTGKRIPVRSPSCTSANKQDVVYAQPVASSKQDAIYAHSN
SKICNDEVDYGAMTIQKAIQLLCSSDEKYQAMGGYYLQHTCFQDESAKQEVYRLNGIAKL
VELLRSSDENVQQAAAGALRNLVFRNPTNKLETRRQNGIRECVSLLRRTGNTEIQKQLTG
LLWNLSSTDELKEDLIHEALPVLTDCVIIPFSGWTDGIVNRSREIVDPEVFFNATGCLRN
LSSADAGRQTMRNYPGLIDSVMTYSQNCVAANRPDDKSVENCICILHNLSYRLDSEVPNK
YTQLNHMARNTYTDKTLTGCFNNRGGRVEYDEYDMPLPEEDYKPKGSSWLYHSDAIRTYL
SLMDQSKKDATLEACAGALQNLTASRGLMSNGMSQLIALKEKGLPRIARLLQSNNAEVVR
SGTSLLSNMSRHPILHKTMAHQVLPDVTRLLALQAPGSSNYGDIMSSACYTLRNLIMSNP
QMAKPYLTGSLINNVVGLCRNGSYPKAAEAARLLLADLWSNRELQSMLKQQGYDKSMMGS
LTGSTFRNLSSRF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactctccttctccactgaaaacagcactggcttatgaatgtttccaggaccag
gccaattcgactctagctttgccctcggatcacaagctgaaaactaggggtacaggaaaa
cagagggtccaggagcaggtgatgatgacagtgaaacggcagaagcaaaagtcctccctg
tcatcgaacacaggccattcaaatcgaggttctatatatgatggtctgtctgatggttat
agctatggaacagcccgtggtagctactatggaaaagcccacacaggaaacaattggggc
catgggctgtacaatggaacaatcaaaagggacacagaaaataaacgctacagctcctac
agccaaatggaaagctggggtagcaagcattacaataagatgtgcagccctacaagtcct
ggcagtgattactgctttgtaaacttgaagagtagccgaagtgagccagacctctactat
gaccctccacgaagcacactaaggagaaaccagagtggaagtcgtatggggcacaaggcc
acactgaatcgtaacagcatctacagcagctataacaatcaaggcactataaccacaacg
aggacaggcaaaagaattccagtgcgtagtccctcctgtacctctgctaacaagcaagat
gtggtctatgcccagcctgtagcaagcagcaaacaagatgcaatttatgcacactccaac
tccaaaatctgcaatgatgaggtggattatggagcaatgactatccagaaagcaatacag
ctcctgtgttcctcagatgagaagtaccaggccatgggtggttactatctccagcacaca
tgctttcaagatgaatctgccaagcaagaggtctaccgactcaatggcattgccaagctt
gttgaactcctccgcagctcagatgaaaatgtgcagcaggctgcggcaggagcccttcga
aacttagtcttcagaaatccaaccaacaagttagaaacccgacggcagaatggaattcga
gagtgtgtaagccttctgaggagaactggaaacacagaaatacagaaacaattgacagga
ttgctctggaatttatcatccactgatgagctgaaagaagatttgatacatgaagctctc
cctgttttgactgattgtgttattatccctttttctggatggactgatggcattgttaac
agatcaagagaaattgttgatcctgaagtattcttcaatgccactggctgtttgaggaac
ctgagttctgcagatgcgggacgccaaactatgagaaactaccctggtttgattgactct
gtgatgacttattcccaaaactgcgtggcagccaaccggccagatgacaagtctgtggag
aactgcatctgtatcctacacaatctgtcctaccgcttggattctgaggtgcctaataaa
tacacacagcttaatcacatggccaggaacacttacaccgacaaaaccctgactggctgc
ttcaacaacagaggtggaagagtggagtatgatgagtatgatatgcctcttcctgaggag
gactacaaacccaaggggtccagctggctctaccattcagatgccatccggacatatctg
tctctgatggaccagagcaagaaagatgccaccctagaagcttgtgctggagccttgcaa
aacctaactgcaagcagaggactgatgtcaaatggaatgagccagctgattgctttgaag
gagaaaggattacctcgtatagcacgtctcctacagtccaacaatgcagaggttgtgcga
tctggaacatccttgctgagtaatatgtctcgacaccccattctccacaagactatggct
caccaagtactcccagatgtgactcgtcttctagctctccaggctcctggttccagcaat
tatggagacattatgtcatctgcttgttacaccctgagaaacttgatcatgtccaatcca
cagatggccaagccctacctgacaggcagtctgataaataacgtagtaggcctgtgccga
aatggttcctacccaaaagcagctgaagctgctcgtcttctattggctgacctgtggtca
aacagggagctccagtctatgctaaagcagcaaggatatgataagagtatgatgggatcc
ttaacaggaagcactttcaggaacctgtcctctagattctaa
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