Sphaerodactylus townsendi (Townsend's least gecko): 125444173
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Entry
125444173 CDS
T08213
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stow04131
]
125444173 (OTOF)
Membrane trafficking [BR:
stow04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125444173 (OTOF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
125444173
NCBI-ProteinID:
XP_048372569
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All DBs
Position
LG01:30234568..30418854
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AA seq
2126 aa
AA seq
DB search
MALIVRLKTVTHLRGKGDRIAKVAFRGLSFYTRVLENCEDEAPFDETFRWPIASSIDVNE
MLEVQVFNYSKVFSNRLVGTFRMVLQKVVEEGQLEVTDTLIDDNNAVIRTSISIEIRYHA
MDGTVGAWNDEEFLESPNARSEGDPYETEGLLSSHRQSPSKASAAERALRRQEENEMYYH
SDDELLGEGDTISQGSLNASLGEDGEDYECKLSGLQNKTRDGYKSITSDEHEDSRDKAKG
KEKKHLHLPFSKGKEKTKGDHKAGKGVFSAMKLGKARAPKDDHRKQDEPAVLEAEDLDRK
AMRLGGGLDPDTISLASVTAVTTNVSNKRSKPDIKMEPSAGRPMDYQVSVTIIEARQLVG
LNMDPVVCVEVGEEKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKILKLSVIHSKNLL
RSGTLVGSFKMDVGTVYSQPEHQFYHKWAILSDPEDITAGLKGYLKVDVAVVGKGDNIKT
PHKANETDEDDIEGNLLLPDGVPPERQWARFYIKIYRAEGLPRMNTSIMANVKKALIGEN
KDLVDPYVQVVFAGQKGKTSVQKSSYEPLWNEQIVFTEMFPPLCKRIKVQIRDSDKVNDV
AIGTHFIDLRKVSNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQDLNEGLGEGVSFRAR
LLIGLSVEILDTSNPEITSSTEVQLEQATPVADNCTGKMEDFFLFGSFLEATMIDRKNGE
KPINFEVTIGNYGNEIDGMAKPVIKKKKEGGAGSEEASELLQNSSDEEGNDDEEFVSISV
TPPMRPLITDRNYFHLPYFDKKPCIYIKSWWQDQRRRLYNANTMDKIADKLEEGLNDVHE
MMKTEKPHPERRLRGVLEELSSGCLRFVTLVNKDQNHSSRTRLDRERLKSCMRELETMGQ
QAKTLRSQVKKTTIREKLKQSQNFLQKLRFLADEPQHSIPDIFIWMISNNKRIAYARIPS
KDLLYSIVDEEMGKDCGKVKTVFLKLPGKKGFGPAGWTVQAKMEIYLWLGLNKQRKDFLT
GLPCGFEERKLPKGQGIPFFPPIGLLYTKKQVFQLRVHMYQARSLFAADSSGLSDPFARV
FFITQSQCTEVLNETLCPTWDQLLVFDNVELYGEVHEMRDDPPIIVIEIYDQDTVGKADF
MGRTFAKPVVKMSDEEYCPPRFPPQLEYYQIYRGNSTAGDLLAAFELLQLPYNDEEIRRA
LLAATHLCVPQIKIGLAGKSDLPPIDGPTDMDRGPILPVPLGIRPVLSKYRVEILFWGLR
DLKRVNLAQVDRPRVDIECAGRGVQSSLIQNYKKNPNFSTLVKWFEVDLPENELLHPPLN
IRVVDCRAFGRYTLVGSHAVNSLRKFIYRPPDKKAQHWSTAAKLMNAYATLANGGPCSHP
AGEIVVNVEPEVPIKKMETMVKLEANSDAVVKVDASEEEKEKKKKKKKGAAEEIEDDEPD
ESMLDWWSKYFASIETMKEHLRQLEAAAAEAEEKEEMDMTEEIKLDDSPMKGTKGQGKSK
EKMKLPKEDKKKKQQQQQQTQQLEVLEKKNKQKIDELKVYPKELETEFDNFEDWLHTFNL
LRGKIGDDDDNAADEERIVGRFKGSMCVYKVPLPDDITKEAGYDPNFGMFQGIPSNDPIN
VLVRVYVVRATDLHPADINGKADPYVVIKLGKTDIKDKENYISKQLNPVFGKSFDIEATF
PMESMLTVAIYDWDLVGSDDLIGETKIDLENRYYSKHRATCGISTTYSIHGYNIWRDPQK
PTQILSKLSKEGKLDGPHYGPGGRVKVTNRVFTGPTELEDENGQKKQTDEHLALTVLHHW
EDIPRVGCKLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGPAIDISPRKPKK
YELRVIVWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNW
RYIFPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGAIELDL
NRFPRGAKTAKQCSLELGTGEAEVPMISIFKQKRVKGWWPFLARDENDEIEITGKVEAEL
HLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIRYFIWHKYRWLLLKILL
LVLLLLLVGLFLYSMPGYLVKKLLGA
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atggccctgatcgtgcgcctgaagaccgtcacccacctgcgaggcaaaggcgaccgcatc
gccaaagtggcttttcgaggcctctccttctacaccagagtgcttgaaaattgtgaggat
gaagctccatttgatgagacattccggtggccaattgctagcagtattgatgttaatgag
atgttggaagttcaggtgttcaactatagcaaggtcttctccaatagactcgttgggaca
ttccggatggtcttgcagaaggtggtggaagaaggacagctggaggtgacagacacgctt
atagatgacaacaatgcggtcattcggaccagcatctccatcgagattagataccacgcc
atggatggcacagtcggtgcttggaacgacgaggaattcttggagagtcccaatgcacgt
tcggagggcgatccctatgagacagaaggcctgctttccagtcaccggcaatctcccagc
aaggccagcgctgcagagagggctctccggaggcaggaagaaaatgagatgtattaccac
agtgatgatgaacttctgggcgagggagacaccatcagccagggctctctcaatgcgagt
ttgggagaagatggagaagactatgaatgcaaactgtcaggactccagaataagacccgt
gacggttacaaatccattaccagcgatgagcatgaagactccagagataaggctaagggg
aaagagaaaaaacacctccatttgccattcagcaaaggcaaagagaagacaaagggagat
cacaaagctgggaaaggagtcttttcagccatgaagcttggcaaggcacgtgctccaaag
gatgaccacaggaagcaagatgaaccggctgttctggaagctgaagacctggaccggaaa
gcaatgcggctgggaggcggcttggatccagacacaatttccctggcatcagtcacagct
gttaccaccaatgtctctaataagagatcgaaaccagatattaaaatggagcccagtgct
ggaagacccatggattaccaggtcagtgtcacaataatagaggcacggcagctggtggga
ctcaacatggaccccgtcgtatgcgtggaagtgggggaggaaaagaaatacacatccatg
aaggaatcaactaactgcccctactataatgagtattttgttttcgacttccatgttccc
ccagatgtcatgtttgacaaaatcctcaaattatcggtgattcactccaagaacctgctg
cgcagtggaactttggtgggctctttcaaaatggacgtggggactgtttactcccagcct
gagcatcagttctaccacaagtgggccattctgtccgacccagaagacatcacagcaggc
ctgaaaggttatctgaaggttgatgttgctgtggtgggcaaaggggacaacatcaagaca
ccgcacaaagctaatgagacagatgaggacgacattgaagggaacctgcttcttccagat
ggcgttcctccagaaaggcagtgggctcgtttctatatcaagatttaccgggcagagggt
cttccacgcatgaacaccagcatcatggctaatgtgaagaaggctctcattggggaaaac
aaagatctggtggatccttatgtccaagtggtctttgcaggacagaaggggaagacctct
gtccagaaaagcagctatgagcctctatggaacgagcagattgtcttcacagagatgttc
cccccactctgcaagaggatcaaggtccagatccgtgattctgacaaagttaatgatgtg
gccattgggacccacttcattgacctgaggaaggtctccaatgagggagacaaaggtttc
ctgcccacctttggtcctgcctgggtaaacatgtatggctccacccgcaactatacccta
atggacgaacaccaggacttgaacgaaggacttggagagggggtttccttccgtgctcgt
ctactcatcggcctgtcagtggagatcttagacaccagcaaccctgagatcaccagttcc
acggaggttcagttggaacaggccacaccagtcgctgataactgtacgggcaagatggag
gatttctttctctttgggtccttcctggaagccaccatgattgacagaaagaatggagaa
aagccaatcaactttgaagtcacaataggtaattatggcaatgagattgatgggatggct
aagcctgtcatcaagaaaaagaaagaaggtggggctggcagtgaagaggcatctgagttg
ctacaaaactcaagtgatgaggaaggcaacgatgatgaagaatttgtctctatctctgtt
actccaccaatgaggcccttgatcaccgacaggaattatttccacttgccgtattttgac
aagaagccttgcatatacatcaagagttggtggcaggatcagagaaggcgtctctacaat
gcaaacaccatggacaagattgctgacaagctggaagaaggtctgaatgacgtgcacgag
atgatgaagacagagaaaccccaccctgagcgtcgtctccgaggggtgctggaggagttg
agcagcgggtgtctacgatttgtgaccctcgtcaacaaagaccagaaccactcttctcgc
acacgcctggacagagagaggctgaaatcttgcatgagggagctggagaccatgggccag
caggccaagaccttgcggtcccaggtgaagaaaaccaccatcagggagaaactgaaacag
tcacagaacttcctacaaaaactgcgattcctggcagatgagccccagcacagcatcccg
gacatcttcatctggatgataagcaacaataaacgcattgcttatgcccgcatcccttcc
aaggacctcctctactccatcgtggatgaggaaatgggcaaagactgtgggaaagtgaag
actgttttcctgaagctacctggaaaaaaggggtttgggccagctggctggactgtgcag
gccaaaatggagatctacttgtggctgggcctcaacaagcagcggaaagacttcctcact
ggcctaccctgtggttttgaggagaggaaactgcccaaaggacaaggcattcccttcttc
cctcccattggcctcctgtacaccaagaagcaggtcttccagttgcgagtccacatgtac
caggccaggagtttgtttgctgcagacagcagtggtctgtccgatccttttgcccgggtc
ttcttcatcactcagagccagtgcactgaggtcctcaatgaaactctttgccctacctgg
gaccagctgctggtatttgacaacgtagagttgtatggagaagtccacgagatgcgggat
gaccctcccattatagtcattgagatctatgaccaagatacagtggggaaggccgacttc
atgggccgaacgttcgctaagcctgtggtgaagatgtcagatgaggagtactgtccccct
cgcttcccaccacaactggagtattaccagatttacagggggaattccactgctggtgac
ctgctggccgcttttgagttgctccagcttccatacaatgacgaagagatcaggagggcc
ttgctggcagccacccatctttgcgtgcctcagatcaagattggcctagctgggaagtcg
gatctgcctcccattgatggccctacagacatggacaggggccccatcctgccagtgcct
ctgggtatccgtcccgtattgagcaaatacagagtggagatattgttctggggactgaga
gacctgaagcgtgtgaatttggcccaagtggatcggcctcgagtggacatcgaatgtgca
gggagaggagtccagtcatctctcatccagaactacaagaaaaaccccaatttcagcacc
ttggtcaagtggtttgaagtggatctacctgaaaacgaactcctccatccccccctaaat
atccgggtggtcgattgccgtgcctttgggcgatacacactggtgggcagccatgctgtc
aactccttgcgcaagttcatctatcggcctccggataagaaggcccagcactggagcaca
gcagctaagctcatgaatgcctacgcgaccctggcaaacggaggcccctgctctcatccc
gcaggtgaaattgtagtcaatgtggagcctgaggttcccatcaagaaaatggaaactatg
gtgaagctggaagcgaactctgatgcagttgttaaggtggacgcgtcagaagaagagaag
gagaaaaagaagaaaaagaagaaaggcgccgctgaagaaattgaagatgatgaacctgat
gagagcatgctggactggtggtccaagtattttgcttccatagagacaatgaaggagcac
cttcgtcagttggaagcagctgcagcagaggccgaggagaaggaagaaatggacatgaca
gaggaaatcaaacttgatgactctcccatgaaaggcaccaagggccaagggaaatccaag
gagaaaatgaagctgcccaaagaggacaagaagaagaaacagcagcagcagcagcagact
cagcaactagaagtcctcgagaagaagaacaagcagaagatcgatgagctgaaggtgtat
cccaaagagctggaaacggaatttgacaactttgaggactggctgcacactttcaacctc
ttgcgcgggaagattggtgatgacgacgacaacgctgctgacgaggagcgcatagtgggc
aggttcaagggctctatgtgtgtgtacaaagtgccgctccctgatgatatcaccaaggag
gctggatacgacccaaatttcggcatgttccagggaatcccaagcaatgatcccatcaac
gtgctggtccgggtctacgttgttcgggccactgatctgcatcctgctgatatcaatggg
aaagctgatccctatgttgtcattaagctgggaaagacggacatcaaggacaaagagaac
tacatctccaaacagctgaacccggtctttggaaagtcatttgatattgaggctacattc
cccatggaatccatgctgaccgtggctatctatgactgggacttggtgggctccgatgat
ctgattggcgaaacaaagatagacttggagaatcgatactacagcaaacacagagcaacc
tgcggtatctccacgacctattccattcatggttacaacatttggcgagacccccaaaag
cccactcagatcttatccaagctaagtaaagaggggaaacttgatggcccccattatggt
cctggtggcagagtaaaggtcaccaaccgggtcttcactggccctacagaactggaggat
gaaaatggtcagaagaaacagacagatgagcatctggcactgacggtgttgcaccactgg
gaagatatcccccgtgtcggctgcaagcttgtacctgagcacgtggaaacacgccccttg
ctcaaccctgacaagccaggcattgaacagggtcgactggagttgtgggtggacatgttc
cccatggacatgccagcaccaggccccgccattgacatctcgccaaggaagccaaagaaa
tacgagcttagagtgatagtgtggaacactgatgaggtaatcctggaggatgatgattac
ttcactggcgagaaatccagtgacatttttgtccgggggtggctgaaggggcaacaggaa
gacaagcaggacactgacgtccactaccactccctgacaggggagggcaacttcaactgg
cgctatatctttccttttgactacctagcagctgaggagaagattgtcatctctaagaaa
gagtctatgttctcctgggacgagaccgagtacaagataccggcccgactcacgctacag
gtgtgggatgccgaccacttttctgccgatgacttccttggagctattgagcttgacctg
aaccgctttccccgtggcgctaagacagccaaacagtgcagcctggagctgggaaccggc
gaggcagaagtgcccatgatttccatcttcaagcagaagagggtgaagggctggtggccc
ttcttggcaagagacgagaacgatgaaattgagatcacgggcaaagtggaagctgagctg
catcttctgacagccgaggaagccgagaaaagtccggccgggctggctcgtaacgagccc
gacccattggagaaacccaaccggccagataccagcttcatctggttcctgaaccctctc
aagtctatccgctactttatctggcacaagtatcgttggctcctgctgaaaattcttctc
ctcgttctcttgctccttctggttggcctcttcctttactccatgcccggctacctggtc
aagaaacttcttggggcctga
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integrated database retrieval system
